RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 CSF1RP07333 972 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 PCNX4Q63HM2 1172 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 TNIP2Q8NFZ5 429 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 CKAP2Q8WWK9 683 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 UTP6Q9NYH9 597 aaKnown RBP18.85■□□□□ 0.61
SMC4-201ENST00000344722 CHORDC1Q9UHD1 332 aaPredicted RBP18.85■□□□□ 0.61
SMC4-201ENST00000344722 BGNP21810 368 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 RNF139Q8WU17 664 aa18.85■□□□□ 0.61
SMC4-201ENST00000344722 MRPL4Q9BYD3 311 aaKnown RBP18.85■□□□□ 0.61
SMC4-201ENST00000344722 PSMD3O43242 534 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 WFS1O76024 890 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 YWHABP31946 246 aaKnown RBP18.84■□□□□ 0.61
SMC4-201ENST00000344722 FAM71DQ8N9W8 422 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 PPHLN1Q8NEY8 458 aaKnown RBP18.84■□□□□ 0.61
SMC4-201ENST00000344722 TSPAN17Q96FV3 270 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 INTS13Q9NVM9 706 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 RPL26L1Q9UNX3 145 aaKnown RBP18.84■□□□□ 0.61
SMC4-201ENST00000344722 NRXN1Q9ULB1 1477 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 FOXN3O00409 490 aaPredicted RBP18.84■□□□□ 0.61
SMC4-201ENST00000344722 FCHO1O14526 889 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 VCAM1P19320 739 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 PTDSS1P48651 473 aaKnown RBP18.84■□□□□ 0.61
SMC4-201ENST00000344722 ZNF543Q08ER8 600 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 RBBP7Q16576 425 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 FAM98CQ17RN3 349 aaKnown RBP18.84■□□□□ 0.61
SMC4-201ENST00000344722 RMDN3Q96TC7 470 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 BRD8Q9H0E9 1235 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 C2orf40Q9H1Z8 148 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 MAD2L2Q9UI95 211 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 FNDC3AQ9Y2H6 1198 aaKnown RBP18.84■□□□□ 0.61
SMC4-201ENST00000344722 CBX6O95503 412 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 KCNA2P16389 499 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 C16orf72Q14CZ0 275 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 GSTA3Q16772 222 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 WDR60Q8WVS4 1066 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.84■□□□□ 0.61
SMC4-201ENST00000344722 SOX13Q9UN79 622 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 HNRNPCL2B2RXH8 293 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 SHOX2O60902 331 aaPredicted RBP18.84■□□□□ 0.61
SMC4-201ENST00000344722 AKR1B1P15121 316 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 KCNJ2P63252 427 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 AMPD2Q01433 879 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 PRKG1Q13976 671 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 THEMIS2Q5TEJ8 643 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 LMBRD2Q68DH5 695 aaPredicted RBP18.84■□□□□ 0.61
SMC4-201ENST00000344722 ULK4Q96C45 1275 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 GABBR1Q9UBS5 961 aa18.84■□□□□ 0.61
SMC4-201ENST00000344722 CLRN2A0PK11 232 aa18.83■□□□□ 0.61
SMC4-201ENST00000344722 KPNA4O00629 521 aaPredicted RBP18.83■□□□□ 0.61
SMC4-201ENST00000344722 CNGA2Q16280 664 aa18.83■□□□□ 0.61
SMC4-201ENST00000344722 PCDHGC5Q9Y5F6 944 aa18.83■□□□□ 0.61
SMC4-201ENST00000344722 SNX13Q9Y5W8 968 aa18.83■□□□□ 0.61
SMC4-201ENST00000344722 A0A0U1RQJ8 604 aa18.83■□□□□ 0.61
SMC4-201ENST00000344722 MAP3K7CLP57077 242 aa18.83■□□□□ 0.61
SMC4-201ENST00000344722 TBL3Q12788 808 aaKnown RBP18.83■□□□□ 0.61
SMC4-201ENST00000344722 SLC45A4Q5BKX6 768 aa18.83■□□□□ 0.61
SMC4-201ENST00000344722 TEX12Q9BXU0 123 aa18.83■□□□□ 0.61
SMC4-201ENST00000344722 TMEM247A6NEH6 219 aa18.83■□□□□ 0.6
SMC4-201ENST00000344722 SNX19Q92543 992 aa18.83■□□□□ 0.6
SMC4-201ENST00000344722 IFT43Q96FT9 208 aa18.83■□□□□ 0.6
SMC4-201ENST00000344722 RUBCNLQ9H714 662 aa18.83■□□□□ 0.6
SMC4-201ENST00000344722 DNAJC16Q9Y2G8 782 aa18.83■□□□□ 0.6
SMC4-201ENST00000344722 MROH7Q68CQ1 1323 aa18.83■□□□□ 0.6
SMC4-201ENST00000344722 KCNA1Q09470 495 aa18.83■□□□□ 0.6
SMC4-201ENST00000344722 MICU2Q8IYU8 434 aa18.83■□□□□ 0.6
SMC4-201ENST00000344722 KIAA1210Q9ULL0 1709 aa18.83■□□□□ 0.6
SMC4-201ENST00000344722 PDGFRAP16234 1089 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 SERPINB5P36952 375 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 IFNEQ86WN2 208 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 MTMR4Q9NYA4 1195 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 SLC13A4Q9UKG4 626 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 F5H6K3 240 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 ZBTB39O15060 712 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 CYP11B2P19099 503 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 GRK2P25098 689 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 EIF2B2P49770 351 aaKnown RBP18.82■□□□□ 0.6
SMC4-201ENST00000344722 CDK16Q00536 496 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 RUNX1T1Q06455 604 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 KLRC3Q07444 240 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 RIPK1Q13546 671 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 DMC1Q14565 340 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 SLC26A11Q86WA9 606 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 APPL1Q9UKG1 709 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 IFNA8P32881 189 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 KCTD2Q14681 263 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 PDPK2PQ6A1A2 396 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 VPS50Q96JG6 964 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 CNGB3Q9NQW8 809 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 CSADQ9Y600 493 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 CEP152O94986 1710 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 CNTFP26441 200 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 CCDC85BQ15834 202 aaPredicted RBP18.82■□□□□ 0.6
SMC4-201ENST00000344722 NT5DC3Q86UY8 548 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 AGPAT3Q9NRZ7 376 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 XRCC4Q13426 336 aa18.82■□□□□ 0.6
SMC4-201ENST00000344722 CAMSAP1Q5T5Y3 1602 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 SGPL1O95470 568 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 PARVBQ9HBI1 364 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 SLC5A4Q9NY91 659 aa18.81■□□□□ 0.6
SMC4-201ENST00000344722 NINJ2Q9NZG7 142 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms