RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 IFT81Q8WYA0 676 aa21.19■□□□□ 0.98
RTN1-202ENST00000342503 MRPL45Q9BRJ2 306 aaKnown RBP21.19■□□□□ 0.98
RTN1-202ENST00000342503 IP6K2Q9UHH9 426 aa21.19■□□□□ 0.98
RTN1-202ENST00000342503 AMACRQ9UHK6 382 aa21.19■□□□□ 0.98
RTN1-202ENST00000342503 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.19■□□□□ 0.98
RTN1-202ENST00000342503 THSD7BQ9C0I4 1608 aa21.19■□□□□ 0.98
RTN1-202ENST00000342503 CTSHP09668 335 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 HSPA6P17066 643 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 CNGA2Q16280 664 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 SGO2Q562F6 1265 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 PPP1R15BQ5SWA1 713 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 CCSAPQ6IQ19 270 aaPredicted RBP21.18■□□□□ 0.98
RTN1-202ENST00000342503 ARRDC4Q8NCT1 418 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 CD99L2Q8TCZ2 262 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 NT5C1AQ9BXI3 368 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 SRRDQ9UH36 339 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 USTQ9Y2C2 406 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 BHMG1C9JSJ3 638 aaPredicted RBP21.18■□□□□ 0.98
RTN1-202ENST00000342503 O00370 1275 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 PIRO00625 290 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 RPS6KA5O75582 802 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 CD4P01730 458 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 CHRNA1P02708 482 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 MAN1A1P33908 653 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 EPHB4P54760 987 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 TAS2R40P59535 323 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 TRADDQ15628 312 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 DPH6Q7L8W6 267 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 SESTD1Q86VW0 696 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 ZDHHC14Q8IZN3 488 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 DDX27Q96GQ7 796 aaKnown RBP21.18■□□□□ 0.98
RTN1-202ENST00000342503 MCEEQ96PE7 176 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 TSPAN18Q96SJ8 248 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 SENP6Q9GZR1 1112 aaPredicted RBP21.18■□□□□ 0.98
RTN1-202ENST00000342503 TJP2Q9UDY2 1190 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 STRIP2Q9ULQ0 834 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 ST3GAL5Q9UNP4 418 aa21.18■□□□□ 0.98
RTN1-202ENST00000342503 M0QYV0 167 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 TTI1O43156 1089 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 TRPA1O75762 1119 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 ATF7P17544 494 aaPredicted RBP21.17■□□□□ 0.98
RTN1-202ENST00000342503 CYP3A5P20815 502 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 CST5P28325 142 aaPredicted RBP21.17■□□□□ 0.98
RTN1-202ENST00000342503 TAP1Q03518 808 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 MGAT3Q09327 533 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 PPP2R5EQ16537 467 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 DCUN1D2Q6PH85 259 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 SND1Q7KZF4 910 aaKnown RBP eCLIP21.17■□□□□ 0.98
RTN1-202ENST00000342503 MAATS1Q7Z4T9 603 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 C3orf20Q8ND61 904 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 UBXN6Q9BZV1 441 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 KIAA1257Q9ULG3 409 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 NFU1Q9UMS0 254 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.17■□□□□ 0.98
RTN1-202ENST00000342503 GRIN2DO15399 1336 aa21.17■□□□□ 0.98
RTN1-202ENST00000342503 TCRBV7S2A1N4TA0A589 114 aa21.16■□□□□ 0.98
RTN1-202ENST00000342503 PSTPIP1O43586 416 aa21.16■□□□□ 0.98
RTN1-202ENST00000342503 XPOTO43592 962 aaKnown RBP21.16■□□□□ 0.98
RTN1-202ENST00000342503 PHF2O75151 1096 aa21.16■□□□□ 0.98
RTN1-202ENST00000342503 HMGCRP04035 888 aa21.16■□□□□ 0.98
RTN1-202ENST00000342503 ZNF252P-AS1Q0IIN9 211 aa21.16■□□□□ 0.98
RTN1-202ENST00000342503 PAK2Q13177 524 aa21.16■□□□□ 0.98
RTN1-202ENST00000342503 SMC1AQ14683 1233 aaKnown RBP21.16■□□□□ 0.98
RTN1-202ENST00000342503 RHOT1Q8IXI2 618 aa21.16■□□□□ 0.98
RTN1-202ENST00000342503 PRELID2Q8N945 189 aa21.16■□□□□ 0.98
RTN1-202ENST00000342503 UBA3Q8TBC4 463 aa21.16■□□□□ 0.98
RTN1-202ENST00000342503 CPXM1Q96SM3 734 aa21.16■□□□□ 0.98
RTN1-202ENST00000342503 CFHR5Q9BXR6 569 aa21.16■□□□□ 0.98
RTN1-202ENST00000342503 NME7Q9Y5B8 376 aa21.16■□□□□ 0.98
RTN1-202ENST00000342503 GOLGA8SH3BPF8 625 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 ERBB2P04626 1255 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 HOXD10P28358 340 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 GPD2P43304 727 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 OGDHQ02218 1023 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 SOX4Q06945 474 aaPredicted RBP21.15■□□□□ 0.98
RTN1-202ENST00000342503 NFX1Q12986 1120 aaKnown RBP21.15■□□□□ 0.98
RTN1-202ENST00000342503 KCTD19Q17RG1 926 aaPredicted RBP21.15■□□□□ 0.98
RTN1-202ENST00000342503 EMBQ6PCB8 327 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 RPAINQ86UA6 219 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 C18orf8Q96DM3 657 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 PLVAPQ9BX97 442 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 VIPAS39Q9H9C1 493 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 GOLGA2P5Q9HBQ8 144 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 CREBZFQ9NS37 354 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 SSR1P43307 286 aaKnown RBP21.15■□□□□ 0.98
RTN1-202ENST00000342503 PSMC1P62191 440 aaKnown RBP21.15■□□□□ 0.98
RTN1-202ENST00000342503 SIX1Q15475 284 aaPredicted RBP21.15■□□□□ 0.98
RTN1-202ENST00000342503 PTGISQ16647 500 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 LCLAT1Q6UWP7 414 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 CAVIN3Q969G5 261 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 ZNF560Q96MR9 790 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.15■□□□□ 0.98
RTN1-202ENST00000342503 LCMT1Q9UIC8 334 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 MTUS1Q9ULD2 1270 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 HPCAL4Q9UM19 191 aa21.15■□□□□ 0.98
RTN1-202ENST00000342503 PCNTO95613 3336 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 FSCN2O14926 492 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 RARAP10276 462 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 CHRNA3P32297 505 aa21.14■□□□□ 0.97
RTN1-202ENST00000342503 THPOP40225 353 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms