RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 PTK2BQ14289 1009 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 CHI3L2Q15782 390 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 ZNF394Q53GI3 561 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 CWF19L1Q69YN2 538 aaKnown RBP18.36■□□□□ 0.53
SYDE2-202ENST00000341460 C2orf69Q8N8R5 385 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 GDPD5Q8WTR4 605 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 TMCO1Q9UM00 188 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 COL15A1P39059 1388 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 USP17L10C9JJH3 530 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 MAGEA4P43358 317 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 RECQLP46063 649 aaPredicted RBP18.36■□□□□ 0.53
SYDE2-202ENST00000341460 FXR1P51114 621 aaKnown RBP eCLIP18.36■□□□□ 0.53
SYDE2-202ENST00000341460 DRAP1Q14919 205 aaPredicted RBP18.36■□□□□ 0.53
SYDE2-202ENST00000341460 NR1I3Q14994 352 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 ZSCAN32Q9NX65 697 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 MAD2L2Q9UI95 211 aa18.36■□□□□ 0.53
SYDE2-202ENST00000341460 SMIM31A0A1B0GVY4 71 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 THRAP10827 490 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 ADRA2BP18089 450 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 BNC2Q6ZN30 1099 aaPredicted RBP18.35■□□□□ 0.53
SYDE2-202ENST00000341460 GLYCTKQ8IVS8 523 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 CDKL3Q8IVW4 592 aaPredicted RBP18.35■□□□□ 0.53
SYDE2-202ENST00000341460 ENKURQ8TC29 256 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 CASKIN2Q8WXE0 1202 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 C11orf70Q9BRQ4 267 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 CDC42BPGQ6DT37 1551 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 SHROOM2Q13796 1616 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 HUS1O60921 280 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 CSPG5O95196 566 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 ALOX12P18054 663 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 GCLMP48507 274 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 COASYQ13057 564 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 ZNF568Q3ZCX4 644 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 MEI1Q5TIA1 1274 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 GALNT8Q9NY28 637 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 LIN7AO14910 233 aaPredicted RBP18.35■□□□□ 0.53
SYDE2-202ENST00000341460 ADCY6O43306 1168 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 SMNDC1O75940 238 aaKnown RBP eCLIP18.35■□□□□ 0.53
SYDE2-202ENST00000341460 POTEIP0CG38 1075 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 GPC3P51654 580 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 CBX3Q13185 183 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 HEATR6Q6AI08 1181 aaKnown RBP18.35■□□□□ 0.53
SYDE2-202ENST00000341460 WRNIP1Q96S55 665 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 MAGEB5Q9BZ81 275 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 CASS4Q9NQ75 786 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 FKBP9O95302 570 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 SNRPAP09012 282 aaKnown RBP18.35■□□□□ 0.53
SYDE2-202ENST00000341460 JAK1P23458 1154 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 LRPAP1P30533 357 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 ALDH5A1P51649 535 aaPredicted RBP18.35■□□□□ 0.53
SYDE2-202ENST00000341460 TRAF2Q12933 501 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 FKBP9P1Q75LS8 142 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 BRINP3Q76B58 766 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 RNF135Q8IUD6 432 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 LY9Q9HBG7 655 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 ZNF302Q9NR11 478 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 GJB4Q9NTQ9 266 aa18.35■□□□□ 0.53
SYDE2-202ENST00000341460 ALX1Q15699 326 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 MTDHQ86UE4 582 aaKnown RBP18.34■□□□□ 0.53
SYDE2-202ENST00000341460 PCDHGB4Q9UN71 923 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 SPAG6O75602 509 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 P4HBP07237 508 aaKnown RBP18.34■□□□□ 0.53
SYDE2-202ENST00000341460 BEST2Q8NFU1 509 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 C2orf40Q9H1Z8 148 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 ZNF180Q9UJW8 692 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 RAD51BO15315 384 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 SLC16A4O15374 487 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 BNIP3LO60238 219 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 GUCY1B2O75343 617 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 TUBA4AP68366 448 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 KNOP1Q1ED39 458 aaKnown RBP18.34■□□□□ 0.53
SYDE2-202ENST00000341460 MARK2Q7KZI7 788 aaKnown RBP18.34■□□□□ 0.53
SYDE2-202ENST00000341460 MB21D2Q8IYB1 491 aaPredicted RBP18.34■□□□□ 0.53
SYDE2-202ENST00000341460 KCNB2Q92953 911 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 B3GALT6Q96L58 329 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 FAM213AQ9BRX8 229 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 ADAM30Q9UKF2 790 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 GRID1Q9ULK0 1009 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 MYO1DO94832 1006 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 KLHL18O94889 574 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 RALBP11234 206 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 RBBP7Q16576 425 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 TRIQKQ629K1 86 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 CENPPQ6IPU0 288 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 TMEM270Q6UE05 265 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 KLF6Q99612 283 aaPredicted RBP18.34■□□□□ 0.53
SYDE2-202ENST00000341460 FSD1LQ9BXM9 530 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 SHCBP1LQ9BZQ2 653 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 GRIP2Q9C0E4 1043 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 PLA2R1Q13018 1463 aa18.34■□□□□ 0.53
SYDE2-202ENST00000341460 TBC1D12O60347 775 aa18.33■□□□□ 0.53
SYDE2-202ENST00000341460 TBXAS1P24557 533 aaPredicted RBP18.33■□□□□ 0.53
SYDE2-202ENST00000341460 TAB1Q15750 504 aa18.33■□□□□ 0.53
SYDE2-202ENST00000341460 C6orf62Q9GZU0 229 aaPredicted RBP18.33■□□□□ 0.53
SYDE2-202ENST00000341460 RNF146Q9NTX7 359 aa18.33■□□□□ 0.53
SYDE2-202ENST00000341460 HBS1LQ9Y450 684 aaKnown RBP18.33■□□□□ 0.53
SYDE2-202ENST00000341460 MROH7Q68CQ1 1323 aa18.33■□□□□ 0.53
SYDE2-202ENST00000341460 SMAD1Q15797 465 aaKnown RBP18.33■□□□□ 0.53
SYDE2-202ENST00000341460 LAYNQ6UX15 382 aa18.33■□□□□ 0.53
SYDE2-202ENST00000341460 TRAPPC11Q7Z392 1133 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms