RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 METTL23Q86XA0 190 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 TOP6BLQ8N6T0 577 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 RSAD2Q8WXG1 361 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 NKD2Q969F2 451 aaPredicted RBP16.54■□□□□ 0.24
VAPA-201ENST00000340541 PGLYRP2Q96PD5 576 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 SEMA4AQ9H3S1 761 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 SLC2A4RGQ9NR83 387 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 DNMT3BQ9UBC3 853 aaKnown RBP16.54■□□□□ 0.24
VAPA-201ENST00000340541 HOOK1Q9UJC3 728 aaKnown RBP16.54■□□□□ 0.24
VAPA-201ENST00000340541 SNX9Q9Y5X1 595 aa16.54■□□□□ 0.24
VAPA-201ENST00000340541 KRBA1A5PL33 1030 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 MAPK13O15264 365 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 C4BPAP04003 597 aaKnown RBP16.53■□□□□ 0.24
VAPA-201ENST00000340541 CFHP08603 1231 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 BMP6P22004 513 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 FSHRP23945 695 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 MCCD1P59942 119 aaPredicted RBP16.53■□□□□ 0.24
VAPA-201ENST00000340541 MYO1EQ12965 1108 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 EDRF1Q3B7T1 1238 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 TDRD10Q5VZ19 366 aaKnown RBP16.53■□□□□ 0.24
VAPA-201ENST00000340541 CEP135Q66GS9 1140 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 ASCL5Q7RTU5 278 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 ADSSL1Q8N142 457 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 THEM5Q8N1Q8 247 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 TTC9BQ8N6N2 239 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 ATAD1Q8NBU5 361 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 TMC2Q8TDI7 906 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 XYLT2Q9H1B5 865 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 CEP72Q9P209 647 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 MAN1B1Q9UKM7 699 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 POLIQ9UNA4 740 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 YIPF1Q9Y548 306 aa16.53■□□□□ 0.24
VAPA-201ENST00000340541 PTPRZ1P23471 2315 aaPredicted RBP16.53■□□□□ 0.24
VAPA-201ENST00000340541 STK25O00506 426 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 GABRDO14764 452 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 HUS1O60921 280 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 STAU1O95793 577 aaKnown RBP16.52■□□□□ 0.24
VAPA-201ENST00000340541 LRG1P02750 347 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 PMS1P54277 932 aaKnown RBP16.52■□□□□ 0.24
VAPA-201ENST00000340541 DUSP4Q13115 394 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 HTR4Q13639 388 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 ANGPT1Q15389 498 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 TMEM86AQ8N2M4 240 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 SPATA18Q8TC71 538 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 KBTBD7Q8WVZ9 684 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 PKMYT1Q99640 499 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 TMLHEQ9NVH6 421 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 CDH7Q9ULB5 785 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 FRMD4BQ9Y2L6 1034 aa16.52■□□□□ 0.24
VAPA-201ENST00000340541 CFAP54Q96N23 3096 aa16.52■□□□□ 0.23
VAPA-201ENST00000340541 NRG2O14511 850 aaPredicted RBP16.51■□□□□ 0.23
VAPA-201ENST00000340541 HCRTO43612 131 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 VNN1O95497 513 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
VAPA-201ENST00000340541 RPL13P26373 211 aaKnown RBP16.51■□□□□ 0.23
VAPA-201ENST00000340541 AP3M2P53677 418 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 MYL6P60660 151 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 FOXK2Q01167 660 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 TWF1Q12792 350 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 ADAM9Q13443 819 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 SLC5A9Q2M3M2 681 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 ZACNQ401N2 412 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 PABPC1LQ4VXU2 614 aaKnown RBP16.51■□□□□ 0.23
VAPA-201ENST00000340541 SLC39A12Q504Y0 691 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 ISM2Q6H9L7 571 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 MTSS1LQ765P7 747 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 GET4Q7L5D6 327 aaPredicted RBP16.51■□□□□ 0.23
VAPA-201ENST00000340541 DPH6Q7L8W6 267 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 FRMD5Q7Z6J6 570 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 ZC3H3Q8IXZ2 948 aaKnown RBP16.51■□□□□ 0.23
VAPA-201ENST00000340541 ADGRF2Q8IZF7 708 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 ITFG1Q8TB96 612 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 SHDQ96IW2 340 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 ACBD6Q9BR61 282 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 GTPBP4Q9BZE4 634 aaKnown RBP16.51■□□□□ 0.23
VAPA-201ENST00000340541 DNAJC25Q9H1X3 360 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 AVENQ9NQS1 362 aaPredicted RBP16.51■□□□□ 0.23
VAPA-201ENST00000340541 DDX43Q9NXZ2 648 aaKnown RBP16.51■□□□□ 0.23
VAPA-201ENST00000340541 HSFX1Q9UBD0 423 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 SLC27A5Q9Y2P5 690 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 SIT1Q9Y3P8 196 aa16.51■□□□□ 0.23
VAPA-201ENST00000340541 RIF1Q5UIP0 2472 aaKnown RBP16.51■□□□□ 0.23
VAPA-201ENST00000340541 IKBKBO14920 756 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 RHOP08100 348 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 PTPN2P17706 415 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 RFX1P22670 979 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 ACAT1P24752 427 aaKnown RBP16.5■□□□□ 0.23
VAPA-201ENST00000340541 PSMC2P35998 433 aaKnown RBP16.5■□□□□ 0.23
VAPA-201ENST00000340541 VAMP7P51809 220 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 CDR1P51861 262 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 ENPEPQ07075 957 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 MORC3Q14149 939 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 CCDC142Q17RM4 750 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 ANKRD40Q6AI12 368 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 POTEHQ6S545 545 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 FAM186BQ8IYM0 893 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 GPR152Q8TDT2 470 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 EEF2KMTQ96G04 330 aa16.5■□□□□ 0.23
VAPA-201ENST00000340541 IPO9Q96P70 1041 aaKnown RBP16.5■□□□□ 0.23
VAPA-201ENST00000340541 VRTNQ9H8Y1 702 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms