RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 FSBPO95073 299 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 HMGCRP04035 888 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PGK2P07205 417 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CDKN2BP42772 138 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ITGA8P53708 1063 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SLC18A1P54219 525 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 RPL7AP62424 266 aaKnown RBP11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CDC42EP1Q00587 391 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 STAT4Q14765 748 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 STILQ15468 1287 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ZNF667Q5HYK9 610 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ZNF365Q70YC5 407 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ARMCX2Q7L311 632 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TADA2BQ86TJ2 420 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ZNF410Q86VK4 478 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PASD1Q8IV76 773 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 FBXO16Q8IX29 292 aaPredicted RBP11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 LRRC71Q8N4P6 559 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TFAP2BQ92481 460 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 MCRS1Q96EZ8 462 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ANAPC5Q9UJX4 755 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ITGA11Q9UKX5 1188 aa11.33□□□□□ -0.6
TRAF3IP2-201ENST00000340026 C3orf70A6NLC5 250 aaPredicted RBP11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 DNALI1O14645 258 aaPredicted RBP11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 LGALS2P05162 132 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 RAD23BP54727 409 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 IRX5P78411 483 aaPredicted RBP11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SLC25A11Q02978 314 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 MORF4L2Q15014 288 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ZBTB33Q86T24 672 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TRIM50Q86XT4 487 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 THNSL1Q8IYQ7 743 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 C1orf127Q8N9H9 656 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SLC35B2Q8TB61 432 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 USP6NLQ92738 828 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TSPAN18Q96SJ8 248 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PCDH9Q9HC56 1237 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 E7EVH7 732 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 O00370 1275 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PEX10O60683 326 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 DRD4P21917 467 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 BRD2P25440 801 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PCK1P35558 622 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 VCPP55072 806 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CNGA2Q16280 664 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SEZ6Q53EL9 994 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 EEF1DP3Q658K8 133 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 LLGL2Q6P1M3 1020 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PCGF5Q86SE9 256 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CCDC50Q8IVM0 306 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CHMP6Q96FZ7 201 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 R3HDMLQ9H3Y0 253 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PDZD7Q9H5P4 517 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 LRRC4CQ9HCJ2 640 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SHOC2Q9UQ13 582 aa11.32□□□□□ -0.6
TRAF3IP2-201ENST00000340026 INO80B-WBP1J3KQ70 363 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 GPR25O00155 361 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 VDRP11473 427 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TSHRP16473 764 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 FGFR4P22455 802 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 MARK3P27448 753 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TMOD1P28289 359 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 GCLCP48506 637 aaPredicted RBP11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 LACTBP83111 547 aaPredicted RBP11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TFAMQ00059 246 aaKnown RBP11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 OGDHQ02218 1023 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 NR1H3Q13133 447 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PTPN20Q4JDL3 420 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 TTC19Q6DKK2 380 aaPredicted RBP11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 GPRC5AQ8NFJ5 357 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ATG4AQ8WYN0 398 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 MCEEQ96PE7 176 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 INO80BQ9C086 356 aaPredicted RBP11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CENPHQ9H3R5 247 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PLEKHA5Q9HAU0 1116 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 IVNS1ABPQ9Y6Y0 642 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 EVPLQ92817 2033 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ZNF487B1APH4 448 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ENDOD1O94919 500 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 IQCF3P0C7M6 154 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 STAG3L1P0CL83 205 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 INSRRP14616 1297 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 CHKAP35790 457 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ADCY8P40145 1251 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 LACTB2Q53H82 288 aaPredicted RBP11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 ZC3H12AQ5D1E8 599 aaKnown RBP11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 DCUN1D2Q6PH85 259 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 BBS12Q6ZW61 710 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 EEPD1Q7L9B9 569 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PIGWQ7Z7B1 504 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 SLC4A11Q8NBS3 891 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 NCAPGQ9BPX3 1015 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 C16orf70Q9BSU1 422 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 MINDY3Q9H8M7 445 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 UBN1Q9NPG3 1134 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 NINJ2Q9NZG7 142 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 RNF181Q9P0P0 153 aa11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 BCCIPQ9P287 314 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.31□□□□□ -0.6
TRAF3IP2-201ENST00000340026 PDCD11Q14690 1871 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms