RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.47■■□□□ 1.512e-7■■■■■ 64.2
CLPTM1-201ENST00000337392 PPANQ9NQ55 473 aaKnown RBP24.47■■□□□ 1.51
CLPTM1-201ENST00000337392 PASKQ96RG2 1323 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 SCN1AP35498 2009 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 TCRBV5S1A1TA0A578 114 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 CCNA1P78396 465 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 KDM7AQ6ZMT4 941 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 LINC01465Q8N7H1 131 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 SHCBP1Q8NEM2 672 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 PRMT7Q9NVM4 692 aaPredicted RBP24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 PODXLO00592 558 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 TSPAN1O60635 241 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 CELF2O95319 508 aaKnown RBP24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 KRT1P04264 644 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 CETPP11597 493 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 SLC1A1P43005 524 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 ARFGAP1Q8N6T3 406 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 SLC4A11Q8NBS3 891 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 TMEM35BQ8NCS4 154 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 APOL6Q9BWW8 343 aa24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 PABPC3Q9H361 631 aaKnown RBP24.46■■□□□ 1.51
CLPTM1-201ENST00000337392 DYNC1LI2O43237 492 aaPredicted RBP24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 GRAP2O75791 330 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 MMP3P08254 477 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 IVDP26440 423 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 LSP1P33241 339 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 ITGA8P53708 1063 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 ZNF200P98182 395 aaPredicted RBP24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 SH3PXD2AQ5TCZ1 1133 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 LRIG3Q6UXM1 1119 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 OR6J1Q8NGC5 347 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 ART4Q93070 314 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 PCSK1NQ9UHG2 260 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 DNPEPQ9ULA0 475 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 TRIM66O15016 1216 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 ERBB2P04626 1255 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 CD48P09326 243 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 IL1R2P27930 398 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 SKOR1P84550 965 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 NFX1Q12986 1120 aaKnown RBP24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 PPP2R5EQ16537 467 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 ZNF484Q5JVG2 852 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 JPH2Q9BR39 696 aaPredicted RBP24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 EIF2AQ9BY44 585 aaKnown RBP24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 SCINQ9Y6U3 715 aa24.45■■□□□ 1.5
CLPTM1-201ENST00000337392 HMGB1P1B2RPK0 211 aaPredicted RBP24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 FNTAP49354 379 aa24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 MTMR3Q13615 1198 aa24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 DENND2CQ68D51 928 aa24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 C12orf50Q8NA57 414 aaPredicted RBP24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 OSMRQ99650 979 aa24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 ADCY8P40145 1251 aa24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 AP3M2P53677 418 aa24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 NRLP54845 237 aa24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 GRM1Q13255 1194 aa24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 ACVR2BQ13705 512 aa24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 ZMAT2Q96NC0 199 aaKnown RBP24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 VTA1Q9NP79 307 aa24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 METTL5Q9NRN9 209 aaKnown RBP24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 FLRT1Q9NZU1 646 aa24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 CTNNAL1Q9UBT7 734 aa24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 GJD2Q9UKL4 321 aa24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 TRIP12Q14669 1992 aaPredicted RBP24.44■■□□□ 1.5
CLPTM1-201ENST00000337392 LRRD1A4D1F6 860 aa24.43■■□□□ 1.5
CLPTM1-201ENST00000337392 ERLIN2O94905 339 aa24.43■■□□□ 1.5
CLPTM1-201ENST00000337392 CCL14Q16627 93 aa24.43■■□□□ 1.5
CLPTM1-201ENST00000337392 LONRF1Q17RB8 773 aa24.43■■□□□ 1.5
CLPTM1-201ENST00000337392 TINF2Q9BSI4 451 aa24.43■■□□□ 1.5
CLPTM1-201ENST00000337392 CDC42EP4Q9H3Q1 356 aaKnown RBP24.43■■□□□ 1.5
CLPTM1-201ENST00000337392 SNTG2Q9NY99 539 aa24.43■■□□□ 1.5
CLPTM1-201ENST00000337392 CYP3A5P20815 502 aa24.43■■□□□ 1.5
CLPTM1-201ENST00000337392 PSMC1P62191 440 aaKnown RBP24.43■■□□□ 1.5
CLPTM1-201ENST00000337392 CALCOCO2Q13137 446 aa24.43■■□□□ 1.5
CLPTM1-201ENST00000337392 HPDLQ96IR7 371 aa24.43■■□□□ 1.5
CLPTM1-201ENST00000337392 VCPIP1Q96JH7 1222 aa24.43■■□□□ 1.5
CLPTM1-201ENST00000337392 SLITRK1Q96PX8 696 aa24.43■■□□□ 1.5
CLPTM1-201ENST00000337392 M0QYV0 167 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 RIPK2O43353 540 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 NPTXRO95502 500 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 GTF2A2P52657 109 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 DRG2P55039 364 aaKnown RBP24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 GSTA5Q7RTV2 222 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 KATNAL2Q8IYT4 538 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 C18orf25Q96B23 403 aaPredicted RBP24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 PLVAPQ9BX97 442 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 SYNCQ9H7C4 482 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 GBA2Q9HCG7 927 aaPredicted RBP24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 IP6K2Q9UHH9 426 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 PSTPIP1O43586 416 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 PPFIA4O75335 1185 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 RPS6KA5O75582 802 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 RGS7P49802 495 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 KYNUQ16719 465 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 PPP1R15BQ5SWA1 713 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 KIF12Q96FN5 646 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 HEXIM2Q96MH2 286 aaKnown RBP24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 TSPYL1Q9H0U9 437 aa24.42■■□□□ 1.5
CLPTM1-201ENST00000337392 IQCA1LA6NCM1 817 aa24.41■■□□□ 1.5
CLPTM1-201ENST00000337392 MICAL2O94851 1124 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms