RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 WASF2Q9Y6W5 498 aa15.21■□□□□ 0.03
SNX20-202ENST00000330943 TLR3O15455 904 aaKnown RBP15.2■□□□□ 0.02
SNX20-202ENST00000330943 KRT1P04264 644 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 GSTA2P09210 222 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 ECE1P42892 770 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 GCNT1Q02742 428 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 GAD2Q05329 585 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 MAMLD1Q13495 774 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 THOC5Q13769 683 aaKnown RBP15.2■□□□□ 0.02
SNX20-202ENST00000330943 RNASEH2BQ5TBB1 312 aaKnown RBP15.2■□□□□ 0.02
SNX20-202ENST00000330943 CCDC62Q6P9F0 684 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 MFSD7Q6UXD7 560 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 TTC7BQ86TV6 843 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 ZNF276Q8N554 614 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 RIT2Q99578 217 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 RABGEF1Q9UJ41 708 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 CLUHO75153 1309 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 SGK1O00141 431 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 SMAPO00193 183 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 ITGB5P18084 799 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 GLRA2P23416 452 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 ERFP50548 548 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 AP1B1Q10567 949 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 HIF1AQ16665 826 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 LMBRD2Q68DH5 695 aaPredicted RBP15.2■□□□□ 0.02
SNX20-202ENST00000330943 CCNJLQ8IV13 435 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 KBTBD2Q8IY47 623 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 ACSF2Q96CM8 615 aaPredicted RBP15.2■□□□□ 0.02
SNX20-202ENST00000330943 TRAPPC9Q96Q05 1148 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 PAFAH2Q99487 392 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 MXRA8Q9BRK3 442 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 TMEM121Q9BTD3 319 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 TUBB6Q9BUF5 446 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 ZCWPW1Q9H0M4 648 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 STX18Q9P2W9 335 aaKnown RBP15.2■□□□□ 0.02
SNX20-202ENST00000330943 TBX20Q9UMR3 447 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 EXOC7Q9UPT5 735 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 MAGEA13PA6NCF6 341 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 CYP1A1P04798 512 aaPredicted RBP15.2■□□□□ 0.02
SNX20-202ENST00000330943 UBTFL6P0CB48 400 aaPredicted RBP15.2■□□□□ 0.02
SNX20-202ENST00000330943 NCKAP1LP55160 1127 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 SNRPFP62306 86 aaKnown RBP15.2■□□□□ 0.02
SNX20-202ENST00000330943 CDK16Q00536 496 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 TRAF1Q13077 416 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 CCDC142Q17RM4 750 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 TAB3Q8N5C8 712 aaPredicted RBP15.2■□□□□ 0.02
SNX20-202ENST00000330943 CFAP61Q8NHU2 1237 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 SKA1Q96BD8 255 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 PPCSQ9HAB8 311 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 MRPL47Q9HD33 250 aaKnown RBP15.2■□□□□ 0.02
SNX20-202ENST00000330943 SSU72Q9NP77 194 aaKnown RBP15.2■□□□□ 0.02
SNX20-202ENST00000330943 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.2■□□□□ 0.02
SNX20-202ENST00000330943 SHOC2Q9UQ13 582 aa15.2■□□□□ 0.02
SNX20-202ENST00000330943 YWHABP31946 246 aaKnown RBP15.19■□□□□ 0.02
SNX20-202ENST00000330943 CPA2P48052 419 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 SERPINB4P48594 390 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 CYP24A1Q07973 514 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 RASA2Q15283 850 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 ENOSF1Q7L5Y1 443 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 PYROXD1Q8WU10 500 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 ZDHHC15Q96MV8 337 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 SLITRK1Q96PX8 696 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 ZNF184Q99676 751 aaPredicted RBP15.19■□□□□ 0.02
SNX20-202ENST00000330943 ST6GALNAC4Q9H4F1 302 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 KCNH7Q9NS40 1196 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 ARMCX1Q9P291 453 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 QARSP47897 775 aaKnown RBP15.19■□□□□ 0.02
SNX20-202ENST00000330943 WDR72Q3MJ13 1102 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 ZNF677Q86XU0 584 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 TMC2Q8TDI7 906 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 GATA6Q92908 595 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 RBM41Q96IZ5 413 aaKnown RBP15.19■□□□□ 0.02
SNX20-202ENST00000330943 GBP5Q96PP8 586 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 DDX50Q9BQ39 737 aaKnown RBP15.19■□□□□ 0.02
SNX20-202ENST00000330943 KRT82Q9NSB4 513 aa15.19■□□□□ 0.02
SNX20-202ENST00000330943 DENND3A2RUS2 1198 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 TM9SF1O15321 606 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 AMPD1P23109 780 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 PHBP35232 272 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 PGM1P36871 562 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 PLA2G4FQ68DD2 849 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 BANPQ8N9N5 519 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 FAM161BQ96MY7 647 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 VPS11Q9H270 941 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 KCNK13Q9HB14 408 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 ZNF212Q9UDV6 495 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 HOXA10P31260 410 aaPredicted RBP15.18■□□□□ 0.02
SNX20-202ENST00000330943 NEK3P51956 506 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 VCPP55072 806 aaKnown RBP15.18■□□□□ 0.02
SNX20-202ENST00000330943 RPL7AP62424 266 aaKnown RBP15.18■□□□□ 0.02
SNX20-202ENST00000330943 NOMO3P69849 1222 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 SPP2Q13103 211 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 UGCGQ16739 394 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 MSS51Q4VC12 460 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 SPOPLQ6IQ16 392 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 C3orf62Q6ZUJ4 267 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 USP37Q86T82 979 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 RHPN2Q8IUC4 686 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 RCOR2Q8IZ40 523 aa15.18■□□□□ 0.02
SNX20-202ENST00000330943 ATP11CQ8NB49 1132 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms