RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 SLC26A7Q8TE54 656 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 A0A0G2JND7 137 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 CCDC189A1A4V9 331 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 AGTP01019 485 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 DNAJC3Q13217 504 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 ANO4Q32M45 955 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 CCDC33Q8N5R6 958 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 DIS3LQ8TF46 1054 aaKnown RBP10.12□□□□□ -0.79
COL12A1-201ENST00000322507 PPP1R14AQ96A00 147 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 ADA2Q9NZK5 511 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 BTBD3Q9Y2F9 522 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.12□□□□□ -0.79
COL12A1-201ENST00000322507 ZNF564Q8TBZ8 553 aaPredicted RBP10.12□□□□□ -0.79
COL12A1-201ENST00000322507 THTPAQ9BU02 230 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 ADAMTS1Q9UHI8 967 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 SPDYE5A6NIY4 337 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 TSPAN4O14817 238 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 NPR3P17342 541 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 DUOXA2Q1HG44 320 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 TYSND1Q2T9J0 566 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 FASTKD5Q7L8L6 764 aaKnown RBP10.12□□□□□ -0.79
COL12A1-201ENST00000322507 TRAPPC11Q7Z392 1133 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 NSUN6Q8TEA1 469 aaKnown RBP10.12□□□□□ -0.79
COL12A1-201ENST00000322507 SLC9A2Q9UBY0 812 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 MAPKAPK2P49137 400 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 DYNLT1P63172 113 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 IYDQ6PHW0 289 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 TNIP3Q96KP6 325 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 MMTAG2Q9BU76 263 aaKnown RBP10.12□□□□□ -0.79
COL12A1-201ENST00000322507 RETREG1Q9H6L5 497 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 EVLQ9UI08 416 aaPredicted RBP10.12□□□□□ -0.79
COL12A1-201ENST00000322507 NUP50Q9UKX7 468 aa10.12□□□□□ -0.79
COL12A1-201ENST00000322507 PDS5AQ29RF7 1337 aaKnown RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 KLHL2O95198 593 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 ZNF18P17022 549 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 PTPN12Q05209 780 aaKnown RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 OR6B2Q6IFH4 312 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 NEK10Q6ZWH5 1172 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 PLEKHA5Q9HAU0 1116 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 ZSWIM5Q9P217 1185 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 NXF1Q9UBU9 619 aaKnown RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 SYNJ2BP-COX16A0A087WUM0 186 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 LCP1P13796 627 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 NECTIN1Q15223 517 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 DGUOKQ16854 277 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 METTL8Q9H825 291 aaKnown RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 KLHL11Q9NVR0 708 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 COX16Q9P0S2 106 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 RNF103O00237 685 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 FAM107AO95990 144 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 VDRP11473 427 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 MSH3P20585 1137 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 HNRNPH1P31943 449 aaKnown RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 PHB2Q99623 299 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 CAB39LQ9H9S4 337 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 RUVBL2Q9Y230 463 aaKnown RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 SSU72P8A0A1W2PR75 194 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 BNIP1Q12981 228 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 TCEAL5Q5H9L2 206 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 ELAC2Q9BQ52 826 aaKnown RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 CDY2AQ9Y6F7 541 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 CDY1Q9Y6F8 540 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 C2orf74A8MZ97 194 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 TEX46H3BTG2 121 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 PIGHQ14442 188 aaPredicted RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 EAPPQ56P03 285 aaPredicted RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 COG1Q8WTW3 980 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 ACAT2Q9BWD1 397 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 ABCB6Q9NP58 842 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 TMED5Q9Y3A6 229 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 ZNF521Q96K83 1311 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 NUMA1Q14980 2115 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 MXD4Q14582 209 aaPredicted RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 ZCCHC7Q8N3Z6 543 aaKnown RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 EXTL3O43909 919 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 AP1G2O75843 785 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 PAX7P23759 505 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 ACLYP53396 1101 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 KCNH2Q12809 1159 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 RWDD4Q6NW29 188 aaKnown RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 ZNF677Q86XU0 584 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 C7orf31Q8N865 590 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 UBASH3BQ8TF42 649 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 RAD54LQ92698 747 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 WDR12Q9GZL7 423 aaKnown RBP10.11□□□□□ -0.79
COL12A1-201ENST00000322507 BARHL2Q9NY43 387 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 LRCH1Q9Y2L9 728 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 PIPSLA2A3N6 862 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 F8A1P23610 371 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 RGS7P49802 495 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 FBXW10Q5XX13 1052 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 XRRA1Q6P2D8 792 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 KCTD1Q719H9 257 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 CCDC154A6NI56 674 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 TCP10L2B9ZVM9 353 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 ABLIM1O14639 778 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 ARFIP2P53365 341 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 NRG3P56975 720 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 BBS7Q8IWZ6 715 aa10.11□□□□□ -0.79
COL12A1-201ENST00000322507 ATL2Q8NHH9 583 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms