RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 BBOX1O75936 387 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 GSTT1P30711 240 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 CRKP46108 304 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 MTM1Q13496 603 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 HIF1AQ16665 826 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 ABCB5Q2M3G0 1257 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 SV2AQ7L0J3 742 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 ARHGAP24Q8N264 748 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 TMEM174Q8WUU8 243 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 SKA1Q96BD8 255 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 PAFAH2Q99487 392 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 FAM192AQ9GZU8 254 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 PI4KBQ9UBF8 816 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 RABGEF1Q9UJ41 708 aa18.82■□□□□ 0.6
PRKCB-202ENST00000321728 SGK1O00141 431 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 TM9SF1O15321 606 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 TLR3O15455 904 aaKnown RBP18.81■□□□□ 0.6
PRKCB-202ENST00000321728 PHBP35232 272 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 DYNC1I2Q13409 638 aaKnown RBP18.81■□□□□ 0.6
PRKCB-202ENST00000321728 WDR72Q3MJ13 1102 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 RNASEH2BQ5TBB1 312 aaKnown RBP18.81■□□□□ 0.6
PRKCB-202ENST00000321728 B4GALNT2Q8NHY0 566 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 EZH1Q92800 747 aaPredicted RBP18.81■□□□□ 0.6
PRKCB-202ENST00000321728 MMADHCQ9H3L0 296 aaPredicted RBP18.81■□□□□ 0.6
PRKCB-202ENST00000321728 ANGPTL2Q9UKU9 493 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.81■□□□□ 0.6
PRKCB-202ENST00000321728 AHDC1Q5TGY3 1603 aaPredicted RBP18.81■□□□□ 0.6
PRKCB-202ENST00000321728 TMEM150BA6NC51 233 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 GH2P01242 217 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 RASA2Q15283 850 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 MON1BQ7L1V2 547 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 ARHGAP22Q7Z5H3 698 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 NLRX1Q86UT6 975 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 IWS1Q96ST2 819 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 TMEM121Q9BTD3 319 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 KCNK13Q9HB14 408 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 MRPL47Q9HD33 250 aaKnown RBP18.81■□□□□ 0.6
PRKCB-202ENST00000321728 PCDHB2Q9Y5E7 798 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 ZHX2Q9Y6X8 837 aa18.81■□□□□ 0.6
PRKCB-202ENST00000321728 A8MXQ7 604 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 DNAJC6O75061 913 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 KRT1P04264 644 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 LYNP07948 512 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 RARBP10826 455 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 GLRA2P23416 452 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 RARRES1P49788 294 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 MAMLD1Q13495 774 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 MFSD7Q6UXD7 560 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 IZUMO2Q6UXV1 221 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 C3orf62Q6ZUJ4 267 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 TAB3Q8N5C8 712 aaPredicted RBP18.8■□□□□ 0.6
PRKCB-202ENST00000321728 DRAXINQ8NBI3 349 aaPredicted RBP18.8■□□□□ 0.6
PRKCB-202ENST00000321728 TTC17Q96AE7 1141 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 C1orf112Q9NSG2 853 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 CLUHO75153 1309 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 B2RBV5 119 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 FCHO1O14526 889 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 MYL2P10916 166 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 ECE1P42892 770 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 GAD2Q05329 585 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 KRT72Q14CN4 511 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 GSTA3Q16772 222 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 CCDC142Q17RM4 750 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 BANPQ8N9N5 519 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 POMGNT1Q8WZA1 660 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 KIFC3Q9BVG8 833 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 COA1Q9GZY4 146 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 EHMT1Q9H9B1 1298 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 SHOC2Q9UQ13 582 aa18.8■□□□□ 0.6
PRKCB-202ENST00000321728 H3BRJ5 948 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 LPXNO60711 386 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 LGR5O75473 907 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 P4HBP07237 508 aaKnown RBP18.79■□□□□ 0.6
PRKCB-202ENST00000321728 CFHP08603 1231 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 TCF4P15884 667 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 DSG3P32926 999 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 FAM102BQ5T8I3 360 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 RCOR2Q8IZ40 523 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 ATP11CQ8NB49 1132 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 CERKQ8TCT0 537 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 OXNAD1Q96HP4 312 aaPredicted RBP18.79■□□□□ 0.6
PRKCB-202ENST00000321728 NR1H4Q96RI1 486 aaPredicted RBP18.79■□□□□ 0.6
PRKCB-202ENST00000321728 RANBP17Q9H2T7 1088 aaKnown RBP18.79■□□□□ 0.6
PRKCB-202ENST00000321728 FAM198AQ9UFP1 575 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 BAG2O95816 211 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 DLDP09622 509 aaKnown RBP18.79■□□□□ 0.6
PRKCB-202ENST00000321728 BGNP21810 368 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 ARL4CP56559 192 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 GCNT1Q02742 428 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 ADGRD1Q6QNK2 874 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 CCDC110Q8TBZ0 833 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 ACSF2Q96CM8 615 aaPredicted RBP18.79■□□□□ 0.6
PRKCB-202ENST00000321728 RBM41Q96IZ5 413 aaKnown RBP18.79■□□□□ 0.6
PRKCB-202ENST00000321728 SLITRK1Q96PX8 696 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 EXOC7Q9UPT5 735 aa18.79■□□□□ 0.6
PRKCB-202ENST00000321728 MT-ND3P03897 115 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 VIL1P09327 827 aaKnown RBP18.78■□□□□ 0.6
PRKCB-202ENST00000321728 STAT2P52630 851 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 SNRPFP62306 86 aaKnown RBP18.78■□□□□ 0.6
PRKCB-202ENST00000321728 HHIPL2Q6UWX4 724 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms