RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 FNTAP49354 379 aa18■□□□□ 0.47
SSR4-201ENST00000320857 FLT3LGP49771 235 aa18■□□□□ 0.47
SSR4-201ENST00000320857 GJA9P57773 515 aa18■□□□□ 0.47
SSR4-201ENST00000320857 PURAQ00577 322 aaKnown RBP18■□□□□ 0.47
SSR4-201ENST00000320857 INCA1Q0VD86 236 aa18■□□□□ 0.47
SSR4-201ENST00000320857 HIC1Q14526 733 aa18■□□□□ 0.47
SSR4-201ENST00000320857 SNX17Q15036 470 aa18■□□□□ 0.47
SSR4-201ENST00000320857 CFAP58Q5T655 872 aa18■□□□□ 0.47
SSR4-201ENST00000320857 JAMLQ86YT9 394 aa18■□□□□ 0.47
SSR4-201ENST00000320857 KATNAL2Q8IYT4 538 aa18■□□□□ 0.47
SSR4-201ENST00000320857 GOLGA6L1Q8N7Z2 621 aa18■□□□□ 0.47
SSR4-201ENST00000320857 C7orf31Q8N865 590 aa18■□□□□ 0.47
SSR4-201ENST00000320857 C12orf50Q8NA57 414 aaPredicted RBP18■□□□□ 0.47
SSR4-201ENST00000320857 TSEN2Q8NCE0 465 aaKnown RBP18■□□□□ 0.47
SSR4-201ENST00000320857 C3orf20Q8ND61 904 aa18■□□□□ 0.47
SSR4-201ENST00000320857 BEST2Q8NFU1 509 aa18■□□□□ 0.47
SSR4-201ENST00000320857 ZNF296Q8WUU4 475 aaPredicted RBP18■□□□□ 0.47
SSR4-201ENST00000320857 TRIM51Q9BSJ1 452 aa18■□□□□ 0.47
SSR4-201ENST00000320857 VPS18Q9P253 973 aa18■□□□□ 0.47
SSR4-201ENST00000320857 KIAA1257Q9ULG3 409 aa18■□□□□ 0.47
SSR4-201ENST00000320857 FAN1Q9Y2M0 1017 aa18■□□□□ 0.47
SSR4-201ENST00000320857 ECHS1P30084 290 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 HOXC8P31273 242 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 GBP1P32455 592 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 COILP38432 576 aaPredicted RBP17.99■□□□□ 0.47
SSR4-201ENST00000320857 CETN2P41208 172 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 PTGIRP43119 386 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 CRYBB1P53674 252 aaPredicted RBP17.99■□□□□ 0.47
SSR4-201ENST00000320857 DRG2P55039 364 aaKnown RBP17.99■□□□□ 0.47
SSR4-201ENST00000320857 SIX1Q15475 284 aaPredicted RBP17.99■□□□□ 0.47
SSR4-201ENST00000320857 DUPD1Q68J44 220 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 CCDC137Q6PK04 289 aaKnown RBP17.99■□□□□ 0.47
SSR4-201ENST00000320857 DDX42Q86XP3 938 aaKnown RBP eCLIP17.99■□□□□ 0.47
SSR4-201ENST00000320857 TMEM130Q8N3G9 435 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 CD99L2Q8TCZ2 262 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 PPP1R13LQ8WUF5 828 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 C18orf8Q96DM3 657 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 TSPAN18Q96SJ8 248 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 EIF2AQ9BY44 585 aaKnown RBP17.99■□□□□ 0.47
SSR4-201ENST00000320857 PRDM10Q9NQV6 1147 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 WDR35Q9P2L0 1181 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 USTQ9Y2C2 406 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 AGPSO00116 658 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 SSR1P43307 286 aaKnown RBP17.99■□□□□ 0.47
SSR4-201ENST00000320857 PIGHQ14442 188 aaPredicted RBP17.99■□□□□ 0.47
SSR4-201ENST00000320857 CNGA2Q16280 664 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 ZDHHC14Q8IZN3 488 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 EXD1Q8NHP7 514 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 MCEEQ96PE7 176 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 TWNKQ96RR1 684 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 UPF3AQ9H1J1 476 aaKnown RBP17.99■□□□□ 0.47
SSR4-201ENST00000320857 DPH5Q9H2P9 285 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 LRRC19Q9H756 370 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 CNTN3Q9P232 1028 aa17.99■□□□□ 0.47
SSR4-201ENST00000320857 PIN4Q9Y237 131 aaKnown RBP17.99■□□□□ 0.47
SSR4-201ENST00000320857 TCRBV7S2A1N4TA0A589 114 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 FKTNO75072 461 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 RNF40O75150 1001 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 GJB6O95452 261 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 HMGCRP04035 888 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 C6orf222P0C671 652 aaPredicted RBP17.98■□□□□ 0.47
SSR4-201ENST00000320857 ATF7P17544 494 aaPredicted RBP17.98■□□□□ 0.47
SSR4-201ENST00000320857 LBX1P52954 281 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 GSCP56915 257 aaPredicted RBP17.98■□□□□ 0.47
SSR4-201ENST00000320857 TAS2R40P59535 323 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 RPL7AP62424 266 aaKnown RBP17.98■□□□□ 0.47
SSR4-201ENST00000320857 NKX3-2P78367 333 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 ZNF200P98182 395 aaPredicted RBP17.98■□□□□ 0.47
SSR4-201ENST00000320857 PRKCZQ05513 592 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 ZBTB6Q15916 424 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 SGO2Q562F6 1265 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 PPP1R15BQ5SWA1 713 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 LRRC38Q5VT99 294 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 TAF2Q6P1X5 1199 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 CCDC105Q8IYK2 499 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 LRRC52Q8N7C0 313 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 HEXIM2Q96MH2 286 aaKnown RBP17.98■□□□□ 0.47
SSR4-201ENST00000320857 MTG1Q9BT17 334 aaPredicted RBP17.98■□□□□ 0.47
SSR4-201ENST00000320857 HOMER3Q9NSC5 361 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 HMGXB4Q9UGU5 601 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.98■□□□□ 0.47
SSR4-201ENST00000320857 CASP8AP2Q9UKL3 1982 aa17.98■□□□□ 0.47
SSR4-201ENST00000320857 MYADML2A6NDP7 307 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 GOLGA8KD6RF30 607 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 XPOTO43592 962 aaKnown RBP17.97■□□□□ 0.47
SSR4-201ENST00000320857 RECQL4O94761 1208 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 MICAL2O94851 1124 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 HSPA8P11142 646 aaKnown RBP17.97■□□□□ 0.47
SSR4-201ENST00000320857 STILQ15468 1287 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 PTPN20Q4JDL3 420 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 TTC27Q6P3X3 843 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 ALKAL1Q6UXT8 129 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 CCDC50Q8IVM0 306 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 NIPA2Q8N8Q9 360 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 SH3GL2Q99962 352 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 NT5C1AQ9BXI3 368 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 TRIM31Q9BZY9 425 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 SYNCQ9H7C4 482 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 PARP2Q9UGN5 583 aa17.97■□□□□ 0.47
SSR4-201ENST00000320857 UBQLN1Q9UMX0 589 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms