RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 HCSTQ9UBK5 93 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 GTF2IRD1Q9UHL9 959 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 KCNG1Q9UIX4 513 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 INTUQ9ULD6 942 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 CNTN6Q9UQ52 1028 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 KIAA0100Q14667 2235 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 DNAH14Q0VDD8 3507 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 CASTOR2A6NHX0 329 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 CLDN5O00501 218 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 KIAA0391O15091 583 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 B4GALT3O60512 393 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 CILPO75339 1184 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 MAP3K6O95382 1288 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 CD48P09326 243 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 MMP8P22894 467 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 ECHS1P30084 290 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 VPS41P49754 854 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 ATXN1P54253 815 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 NOTUMQ6P988 496 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 STKLD1Q8NE28 680 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 OR2W6PQ8NHA6 318 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 BCO2Q9BYV7 579 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 DNAJC17Q9NVM6 304 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 COL1A2P08123 1366 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 MICAL2O94851 1124 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 POMCP01189 267 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 RARAP10276 462 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 SCUBE3Q8IX30 993 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 RHOT2Q8IXI1 618 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 PCSK1NQ9UHG2 260 aa7.43□□□□□ -1.22
LYSMD3-201ENST00000315948 RRN3P2A6NIE6 340 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 SEPT4O43236 478 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 ITGB1P05556 798 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 PFKMP08237 780 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 TBXAS1P24557 533 aaPredicted RBP7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 IL1R2P27930 398 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 ADORA2BP29275 332 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 GRM5P41594 1212 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 PTPN11Q06124 597 aaPredicted RBP7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 CDO1Q16878 200 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 PMF1Q6P1K2 205 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 ENOSF1Q7L5Y1 443 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 ZNF410Q86VK4 478 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 TTC30AQ86WT1 665 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 GLIS1Q8NBF1 620 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 MYO1FO00160 1098 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 INHBEP58166 350 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 PTGISQ16647 500 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 C15orf59Q2T9L4 293 aaPredicted RBP7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 ZFYVE27Q5T4F4 411 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 KIAA0319Q5VV43 1072 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 ALKAL1Q6UXT8 129 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 ZNF572Q7Z3I7 529 aaPredicted RBP7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 EXOC8Q8IYI6 725 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 OR6B3Q8NGW1 331 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 RAPGEF5Q92565 580 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 MIS12Q9H081 205 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 ZWILCHQ9H900 591 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 TMEM30AQ9NV96 361 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 ARGLU1Q9NWB6 273 aaPredicted RBP7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 TSPAN16Q9UKR8 245 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 INPP5FQ9Y2H2 1132 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 PPME1Q9Y570 386 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 E5RJQ4 531 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 BEST1O76090 585 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 ANXA13P27216 316 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 TKTP29401 623 aaKnown RBP7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 SCNN1GP51170 649 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 GJA9P57773 515 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 SIX1Q15475 284 aaPredicted RBP7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 MFSD14CQ5VZR4 134 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 C9orf57Q5W0N0 161 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 CCDC50Q8IVM0 306 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 MSL3Q8N5Y2 521 aaKnown RBP7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 ACTRT1Q8TDG2 376 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 KBTBD7Q8WVZ9 684 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 TMEM176AQ96HP8 235 aa7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 METTL5Q9NRN9 209 aaKnown RBP7.42□□□□□ -1.22
LYSMD3-201ENST00000315948 TCRBV5S1A1TA0A578 114 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 TOMM70O94826 608 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 IL18RAPO95256 599 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 RALAP11233 206 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 CLCNKBP51801 687 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 DYNLT1P63172 113 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 POU5F1BQ06416 359 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 DHX9Q08211 1270 aaKnown RBP7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 MBTPS1Q14703 1052 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 ZBTB6Q15916 424 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 SKIDA1Q1XH10 827 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 SYCP2LQ5T4T6 812 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 WDR93Q6P2C0 686 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 SYCE1Q8N0S2 351 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 RASGEF1CQ8N431 466 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 UHMK1Q8TAS1 419 aaKnown RBP7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 DDX27Q96GQ7 796 aaKnown RBP7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 TMPRSS4Q9NRS4 437 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 SNX24Q9Y343 169 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 AGPSO00116 658 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 MAP2K7O14733 419 aa7.41□□□□□ -1.22
LYSMD3-201ENST00000315948 RPS6KA5O75582 802 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms