RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 PDCL3Q9H2J4 239 aa26.5■■□□□ 1.83
CDPF1-201ENST00000314567 VRTNQ9H8Y1 702 aa26.5■■□□□ 1.83
CDPF1-201ENST00000314567 ITGA11Q9UKX5 1188 aa26.5■■□□□ 1.83
CDPF1-201ENST00000314567 RAB21Q9UL25 225 aa26.5■■□□□ 1.83
CDPF1-201ENST00000314567 UBQLN1Q9UMX0 589 aaKnown RBP26.5■■□□□ 1.83
CDPF1-201ENST00000314567 CLCN6P51797 869 aa26.49■■□□□ 1.83
CDPF1-201ENST00000314567 CENPCQ03188 943 aa26.49■■□□□ 1.83
CDPF1-201ENST00000314567 BRD3Q15059 726 aa26.49■■□□□ 1.83
CDPF1-201ENST00000314567 CCDC70Q6NSX1 233 aa26.49■■□□□ 1.83
CDPF1-201ENST00000314567 SCARA5Q6ZMJ2 495 aa26.49■■□□□ 1.83
CDPF1-201ENST00000314567 SELENOOQ9BVL4 669 aa26.49■■□□□ 1.83
CDPF1-201ENST00000314567 GOLPH3Q9H4A6 298 aa26.49■■□□□ 1.83
CDPF1-201ENST00000314567 NXF1Q9UBU9 619 aaKnown RBP26.49■■□□□ 1.83
CDPF1-201ENST00000314567 KCNK3O14649 394 aa26.49■■□□□ 1.83
CDPF1-201ENST00000314567 SYN1P17600 705 aa26.49■■□□□ 1.83
CDPF1-201ENST00000314567 ASPAP45381 313 aa26.49■■□□□ 1.83
CDPF1-201ENST00000314567 ZNF667Q5HYK9 610 aa26.49■■□□□ 1.83
CDPF1-201ENST00000314567 C9orf57Q5W0N0 161 aa26.49■■□□□ 1.83
CDPF1-201ENST00000314567 AVENQ9NQS1 362 aaPredicted RBP26.49■■□□□ 1.83
CDPF1-201ENST00000314567 CISHQ9NSE2 258 aa26.49■■□□□ 1.83
CDPF1-201ENST00000314567 TARSL2A2RTX5 802 aaKnown RBP26.48■■□□□ 1.83
CDPF1-201ENST00000314567 CCDC151A5D8V7 595 aa26.48■■□□□ 1.83
CDPF1-201ENST00000314567 THP07101 528 aa26.48■■□□□ 1.83
CDPF1-201ENST00000314567 CNKSR3Q6P9H4 555 aa26.48■■□□□ 1.83
CDPF1-201ENST00000314567 TMCO2Q7Z6W1 182 aaPredicted RBP26.48■■□□□ 1.83
CDPF1-201ENST00000314567 PAAF1Q9BRP4 392 aa26.48■■□□□ 1.83
CDPF1-201ENST00000314567 CCDC85CA6NKD9 419 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 EOMESO95936 686 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 RHOXF2BP0C7M4 288 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 MCM3P25205 808 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 RBP5P82980 135 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 C2orf54Q08AI8 447 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 WDR72Q3MJ13 1102 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 HPDLQ96IR7 371 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 RHOXF2Q9BQY4 288 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 BCO2Q9BYV7 579 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 FAM124BQ9H5Z6 455 aaPredicted RBP26.47■■□□□ 1.83
CDPF1-201ENST00000314567 TMEM161AQ9NX61 479 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 CASTOR2A6NHX0 329 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 THAP12O43422 761 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 B4GALT3O60512 393 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 STAU1O95793 577 aaKnown RBP26.47■■□□□ 1.83
CDPF1-201ENST00000314567 CALCAP01258 141 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 RFC2P35250 354 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 NSFP46459 744 aaKnown RBP26.47■■□□□ 1.83
CDPF1-201ENST00000314567 RAP1GAPP47736 663 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 DNA2P51530 1060 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 TMCO3Q6UWJ1 677 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 ZNF564Q8TBZ8 553 aaPredicted RBP26.47■■□□□ 1.83
CDPF1-201ENST00000314567 BADQ92934 168 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 VCPIP1Q96JH7 1222 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 PCDHB7Q9Y5E2 793 aa26.47■■□□□ 1.83
CDPF1-201ENST00000314567 UPP2O95045 317 aa26.46■■□□□ 1.83
CDPF1-201ENST00000314567 P4HA1P13674 534 aa26.46■■□□□ 1.83
CDPF1-201ENST00000314567 IKBKEQ14164 716 aa26.46■■□□□ 1.83
CDPF1-201ENST00000314567 WDR93Q6P2C0 686 aa26.46■■□□□ 1.83
CDPF1-201ENST00000314567 MCOLN2Q8IZK6 566 aa26.46■■□□□ 1.83
CDPF1-201ENST00000314567 TMEM199Q8N511 208 aa26.46■■□□□ 1.83
CDPF1-201ENST00000314567 ACTRT1Q8TDG2 376 aa26.46■■□□□ 1.83
CDPF1-201ENST00000314567 RUBCNQ92622 972 aa26.46■■□□□ 1.83
CDPF1-201ENST00000314567 NUP85Q9BW27 656 aa26.46■■□□□ 1.83
CDPF1-201ENST00000314567 CNOT8Q9UFF9 292 aaKnown RBP26.46■■□□□ 1.83
CDPF1-201ENST00000314567 MIF4GDA9UHW6 222 aaKnown RBP26.45■■□□□ 1.83
CDPF1-201ENST00000314567 NOMO3P69849 1222 aa26.45■■□□□ 1.83
CDPF1-201ENST00000314567 GLB1LQ6UWU2 654 aa26.45■■□□□ 1.83
CDPF1-201ENST00000314567 CRIPAKQ8N1N5 446 aa26.45■■□□□ 1.83
CDPF1-201ENST00000314567 HCSTQ9UBK5 93 aa26.45■■□□□ 1.83
CDPF1-201ENST00000314567 SPTLC1O15269 473 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 WEE2P0C1S8 567 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 CD58P19256 250 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 CLCNKBP51801 687 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 NAA35Q5VZE5 725 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 C16orf59Q7L2K0 433 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 ZNF280BQ86YH2 543 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 ZNF606Q8WXB4 792 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 MS4A14Q96JA4 679 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 PNKPQ96T60 521 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 SMYD3Q9H7B4 428 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 CYP3A43Q9HB55 503 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 UBN1Q9NPG3 1134 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 PRKAG2Q9UGJ0 569 aa26.45■■□□□ 1.82
CDPF1-201ENST00000314567 ZMYND8Q9ULU4 1186 aaPredicted RBP26.45■■□□□ 1.82
CDPF1-201ENST00000314567 LTBP2Q14767 1821 aa26.44■■□□□ 1.82
CDPF1-201ENST00000314567 PIRO00625 290 aa26.44■■□□□ 1.82
CDPF1-201ENST00000314567 ERLIN1O75477 346 aa26.44■■□□□ 1.82
CDPF1-201ENST00000314567 LSM8O95777 96 aaKnown RBP26.44■■□□□ 1.82
CDPF1-201ENST00000314567 CDH8P55286 799 aa26.44■■□□□ 1.82
CDPF1-201ENST00000314567 MON1BQ7L1V2 547 aa26.44■■□□□ 1.82
CDPF1-201ENST00000314567 OTOP2Q7RTS6 562 aa26.44■■□□□ 1.82
CDPF1-201ENST00000314567 PHF13Q86YI8 300 aaPredicted RBP26.44■■□□□ 1.82
CDPF1-201ENST00000314567 CYFIP2Q96F07 1278 aa26.44■■□□□ 1.82
CDPF1-201ENST00000314567 SDCBP2Q9H190 292 aa26.44■■□□□ 1.82
CDPF1-201ENST00000314567 EHD2Q9NZN4 543 aa26.44■■□□□ 1.82
CDPF1-201ENST00000314567 LRFN2Q9ULH4 789 aa26.44■■□□□ 1.82
CDPF1-201ENST00000314567 ATMINO43313 823 aaPredicted RBP26.43■■□□□ 1.82
CDPF1-201ENST00000314567 XPOTO43592 962 aaKnown RBP26.43■■□□□ 1.82
CDPF1-201ENST00000314567 DEFB103AP81534 67 aa26.43■■□□□ 1.82
CDPF1-201ENST00000314567 RASGEF1CQ8N431 466 aa26.43■■□□□ 1.82
CDPF1-201ENST00000314567 HNRNPLLQ8WVV9 542 aaKnown RBP26.43■■□□□ 1.82
CDPF1-201ENST00000314567 CARD9Q9H257 536 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms