RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 SDCCAG3Q96C92 435 aa12.9□□□□□ -0.35
EBF1-201ENST00000313708 IMPG2Q9BZV3 1241 aa12.9□□□□□ -0.35
EBF1-201ENST00000313708 PPCSQ9HAB8 311 aa12.9□□□□□ -0.35
EBF1-201ENST00000313708 NR2E1Q9Y466 385 aa12.9□□□□□ -0.35
EBF1-201ENST00000313708 SNX5Q9Y5X3 404 aa12.9□□□□□ -0.35
EBF1-201ENST00000313708 F8W8V4 182 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 NEMP1O14524 444 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 TM9SF1O15321 606 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 CD151P48509 253 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 RASGEF1CQ8N431 466 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 PRELID2Q8N945 189 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 RBM15BQ8NDT2 890 aaKnown RBP12.89□□□□□ -0.35
EBF1-201ENST00000313708 SH3RF3Q8TEJ3 882 aaPredicted RBP12.89□□□□□ -0.35
EBF1-201ENST00000313708 KRT35Q92764 455 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 DCAF5Q96JK2 942 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 ACTL7BQ9Y614 415 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 POTEB3A0JP26 581 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 NOTOA8MTQ0 251 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 RBAK-RBAKDNI3L0D1 243 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 RNASEH1O60930 286 aaKnown RBP12.89□□□□□ -0.35
EBF1-201ENST00000313708 GPC4O75487 556 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 PKN1Q16512 942 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 POTEBQ6S5H4 581 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 SLC30A5Q8TAD4 765 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 GABPB2Q8TAK5 448 aaPredicted RBP12.89□□□□□ -0.35
EBF1-201ENST00000313708 FNDC8Q8TC99 324 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 COA7Q96BR5 231 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 HES6Q96HZ4 224 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 WRNIP1Q96S55 665 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 ADGRB3O60242 1522 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 K7ENM7 598 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 CTSWP56202 376 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 MRPS22P82650 360 aaKnown RBP12.89□□□□□ -0.35
EBF1-201ENST00000313708 TEDDM1Q5T9Z0 273 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 LRRC8EQ6NSJ5 796 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 PAFAH2Q99487 392 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 KIAA1586Q9HCI6 787 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 SMYD2Q9NRG4 433 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 SNX13Q9Y5W8 968 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 EFCAB6Q5THR3 1501 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 PI4K2BG5E9Z4 385 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 SMARCA1P28370 1054 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 SERPINB10P48595 397 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 PICALMQ13492 652 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 NEDD8Q15843 81 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 AAGABQ6PD74 315 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 KLHL35Q6PF15 583 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 DCUN1D1Q96GG9 259 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 MXD3Q9BW11 206 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 PCDH12Q9NPG4 1184 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 SLAIN2Q9P270 581 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 PACSIN3Q9UKS6 424 aa12.89□□□□□ -0.35
EBF1-201ENST00000313708 TRIM16O95361 564 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 PABPC4LP0CB38 370 aaKnown RBP12.88□□□□□ -0.35
EBF1-201ENST00000313708 HSPA8P11142 646 aaKnown RBP12.88□□□□□ -0.35
EBF1-201ENST00000313708 PCP11498 1178 aaKnown RBP12.88□□□□□ -0.35
EBF1-201ENST00000313708 FDFT1P37268 417 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 XIAPP98170 497 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 ODR4Q5SWX8 454 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 PEX5LQ8IYB4 626 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 TSPAN18Q96SJ8 248 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 TMEM109Q9BVC6 243 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 RNPEPQ9H4A4 650 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 LIN28AQ9H9Z2 209 aaKnown RBP12.88□□□□□ -0.35
EBF1-201ENST00000313708 HACD3Q9P035 362 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 RABL2AQ9UBK7 228 aaPredicted RBP12.88□□□□□ -0.35
EBF1-201ENST00000313708 CNTNAP5Q8WYK1 1306 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 SYCE1LA8MT33 242 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 WDR64B1ANS9 1081 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 H3BSA7 217 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 EIF2AK2P19525 551 aaKnown RBP12.88□□□□□ -0.35
EBF1-201ENST00000313708 FAM69CQ0P6D2 419 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 FRA10AC1Q70Z53 315 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 CDKL2Q92772 493 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 VTI1AQ96AJ9 217 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 ARHGEF26Q96DR7 871 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 NT5C1BQ96P26 610 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 FOXP3Q9BZS1 431 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 TAS2R1Q9NYW7 299 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 PKD2L1Q9P0L9 805 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 USP6P35125 1406 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 SERPINI2O75830 405 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 TDP2O95551 362 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 APOA1P02647 267 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 RALAP11233 206 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 DLG1Q12959 904 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 UBE2SQ16763 222 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 TMEM214Q6NUQ4 689 aaKnown RBP12.88□□□□□ -0.35
EBF1-201ENST00000313708 GPAMQ9HCL2 828 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 PCYOX1Q9UHG3 505 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 FRMPD1Q5SYB0 1578 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 CYTH3O43739 400 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 TLR2O60603 784 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 CD97P48960 835 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 IL1RL1Q01638 556 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 ZYXQ15942 572 aaKnown RBP12.88□□□□□ -0.35
EBF1-201ENST00000313708 IL17AQ16552 155 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 SEMA6AQ9H2E6 1030 aa12.88□□□□□ -0.35
EBF1-201ENST00000313708 PDE8AO60658 829 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms