RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 TRIM73Q86UV7 250 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 PLEKHO2Q8TD55 490 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 SH3TC2Q8TF17 1288 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 NDNQ99608 321 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 PCIF1Q9H4Z3 704 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 KRT82Q9NSB4 513 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 KANSL3Q9P2N6 904 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 MYH11P35749 1972 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 FAM155AB1AL88 458 aaPredicted RBP19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 GSTA2P09210 222 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 GTF2H1P32780 548 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 NCKAP1LP55160 1127 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 SLC34A1Q06495 639 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 PKN2Q16513 984 aaKnown RBP19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 CNPY1Q3B7I2 92 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 ACAD10Q6JQN1 1059 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 CLNKQ7Z7G1 428 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 FAM81BQ96LP2 452 aa19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 AVENQ9NQS1 362 aaPredicted RBP19.9■□□□□ 0.78
HERPUD2-201ENST00000311350 MAGEA13PA6NCF6 341 aa19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 PSMG1O95456 288 aa19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 CYP11B1P15538 503 aa19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 RRM1P23921 792 aa19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 RARRES1P49788 294 aa19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 MCL1Q07820 350 aa19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 TNFAIP1Q13829 316 aa19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 WDR72Q3MJ13 1102 aa19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 CAPN12Q6ZSI9 719 aa19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 TRABD2AQ86V40 505 aa19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 RFWD2Q8NHY2 731 aa19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 PTPRN2Q92932 1015 aa19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 EXOC7Q9UPT5 735 aa19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 R3HDM2Q9Y2K5 976 aaKnown RBP19.89■□□□□ 0.77
HERPUD2-201ENST00000311350 WDR91A4D1P6 747 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 CFAP69A5D8W1 941 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 POC1B-GALNT4F8VUJ3 575 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 GSC2O15499 205 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 SLC1A1P43005 524 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 SCNN1BP51168 640 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 HSD17B4P51659 736 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 KRT39Q6A163 491 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 TMC2Q8TDI7 906 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 KAT5Q92993 513 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 BEGAINQ9BUH8 593 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 TMEM8AQ9HCN3 771 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 CYP26A1O43174 497 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 SORBS3O60504 671 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 PTP4A2Q12974 167 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 SPARCL1Q14515 664 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 RASIP1Q5U651 963 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 ENOSF1Q7L5Y1 443 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 SLC47A2Q86VL8 602 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 RELL1Q8IUW5 271 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 HELQQ8TDG4 1101 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 DDX1Q92499 740 aaKnown RBP19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 C12orf65Q9H3J6 166 aaKnown RBP19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 TRABDQ9H4I3 376 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 CYLDQ9NQC7 956 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 ACTL7BQ9Y614 415 aa19.88■□□□□ 0.77
HERPUD2-201ENST00000311350 SLC10A3P09131 477 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 ATF2P15336 505 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 DYNC1I2Q13409 638 aaKnown RBP19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 PDK4Q16654 411 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 COL13A1Q5TAT6 717 aaPredicted RBP19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 CCDC174Q6PII3 467 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 RINLQ6ZS11 566 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 HAUS6Q7Z4H7 955 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 BBOF1Q8ND07 529 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 AZIN2Q96A70 460 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 ZIC5Q96T25 663 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 KIAA1586Q9HCI6 787 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 LNPEPQ9UIQ6 1025 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 A0A1W2PPM1 405 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 GSTTP1A0A1W2PQM5 241 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 GHRHRQ02643 423 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 CENPCQ03188 943 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 PRKG1Q13976 671 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 MAPK6Q16659 721 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 CLEC16AQ2KHT3 1053 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 CEP128Q6ZU80 1094 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 TRIM11Q96F44 468 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 TUBGCP5Q96RT8 1024 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 CSRNP1Q96S65 589 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 DMAP1Q9NPF5 467 aaPredicted RBP19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 ZHX2Q9Y6X8 837 aa19.87■□□□□ 0.77
HERPUD2-201ENST00000311350 QARSP47897 775 aaKnown RBP19.86■□□□□ 0.77
HERPUD2-201ENST00000311350 AP1B1Q10567 949 aa19.86■□□□□ 0.77
HERPUD2-201ENST00000311350 SUPT20HL1Q3ZLR7 823 aa19.86■□□□□ 0.77
HERPUD2-201ENST00000311350 SLC45A4Q5BKX6 768 aa19.86■□□□□ 0.77
HERPUD2-201ENST00000311350 PPM1KQ8N3J5 372 aa19.86■□□□□ 0.77
HERPUD2-201ENST00000311350 KLHL23Q8NBE8 558 aa19.86■□□□□ 0.77
HERPUD2-201ENST00000311350 NT5C1BQ96P26 610 aa19.86■□□□□ 0.77
HERPUD2-201ENST00000311350 BTBD10Q9BSF8 475 aa19.86■□□□□ 0.77
HERPUD2-201ENST00000311350 FOXP3Q9BZS1 431 aa19.86■□□□□ 0.77
HERPUD2-201ENST00000311350 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.86■□□□□ 0.77
HERPUD2-201ENST00000311350 FEM1BQ9UK73 627 aa19.86■□□□□ 0.77
HERPUD2-201ENST00000311350 DHX15O43143 795 aaKnown RBP19.86■□□□□ 0.77
HERPUD2-201ENST00000311350 GAS8O95995 478 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms