RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 LIN9Q5TKA1 542 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 SCARA5Q6ZMJ2 495 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 C4orf50Q6ZRC1 276 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 APTXQ7Z2E3 356 aaKnown RBP19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 RBM23Q86U06 439 aaKnown RBP19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 MICALL1Q8N3F8 863 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 PPM1KQ8N3J5 372 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 SLC22A17Q8WUG5 538 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 FUBP3Q96I24 572 aaKnown RBP eCLIP19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 ERGIC2Q96RQ1 377 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 SYT15Q9BQS2 421 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 MRPL45Q9BRJ2 306 aaKnown RBP19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 NT5C1AQ9BXI3 368 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 ABCB6Q9NP58 842 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 PLCB1Q9NQ66 1216 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 HCFC2Q9Y5Z7 792 aa19.11■□□□□ 0.65
SSSCA1-201ENST00000309328 TGM5O43548 720 aa19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 RPL17P18621 184 aaKnown RBP19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 HOXA9P31269 272 aa19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 KCNC3Q14003 757 aa19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 CTC1Q2NKJ3 1217 aa19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 LILRA6Q6PI73 481 aa19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 CYP26C1Q6V0L0 522 aa19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 OR10T2Q8NGX3 314 aa19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 MAFAQ8NHW3 353 aaPredicted RBP19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 SPPL2BQ8TCT7 592 aa19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 RTP3Q9BQQ7 232 aa19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 CRACR2AQ9BSW2 395 aa19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 FBXW11Q9UKB1 542 aa19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 COG5Q9UP83 839 aa19.1■□□□□ 0.65
SSSCA1-201ENST00000309328 ATP8B3O60423 1300 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 A0A1B0GTH6 734 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 PER2O15055 1255 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 CBFA2T2O43439 604 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 CILPO75339 1184 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 POU2F2P09086 479 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 WEE2P0C1S8 567 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 TUFMP49411 452 aaKnown RBP19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 PLD1Q13393 1074 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 ADAM15Q13444 863 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 RSPO2Q6UXX9 243 aaPredicted RBP19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 FMNL3Q8IVF7 1028 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 TCEAL8Q8IYN2 117 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 CRYBG2Q8N1P7 616 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 B3GALNT2Q8NCR0 500 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 KREMEN2Q8NCW0 462 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 TATDN2Q93075 761 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 RHOBTB2Q9BYZ6 727 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 RTN4Q9NQC3 1192 aaKnown RBP19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 CISHQ9NSE2 258 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 ZDHHC7Q9NXF8 308 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 KIAA1257Q9ULG3 409 aa19.09■□□□□ 0.65
SSSCA1-201ENST00000309328 PRRC2BQ5JSZ5 2229 aaKnown RBP19.08■□□□□ 0.65
SSSCA1-201ENST00000309328 A0A1W2PQC6 194 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 WDR27A2RRH5 827 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 HNRNPA1P09651 372 aaKnown RBP eCLIP19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 SLC9A1P19634 815 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 NDST1P52848 882 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 CDH8P55286 799 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 ARPP19P56211 112 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 FANCCQ00597 558 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 LRMPQ12912 555 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 CFAP221Q4G0U5 840 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 SLC39A12Q504Y0 691 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 FAM171BQ6P995 826 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 OSTM1Q86WC4 334 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 PALB2Q86YC2 1186 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 CMASQ8NFW8 434 aaPredicted RBP19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 MYCBPAPQ8TBZ2 947 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 IQCDQ96DY2 449 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 CEP295NLQ96MC4 621 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 IGFLR1Q9H665 355 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 SFXN1Q9H9B4 322 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 UBE2TQ9NPD8 197 aaPredicted RBP19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 PCDHB5Q9Y5E4 795 aa19.08■□□□□ 0.64
SSSCA1-201ENST00000309328 SPDYE4A6NLX3 237 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 PRRG1O14668 218 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 ADAM12O43184 909 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 PAPLNO95428 1278 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 PDGFRBP09619 1106 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 PTPN1P18031 435 aaKnown RBP19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 LMO2P25791 158 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 RAP1GAPP47736 663 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 UBASH3AP57075 661 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 SKIV2LQ15477 1246 aaKnown RBP19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 KLHDC7AQ5VTJ3 777 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 PHLDB3Q6NSJ2 640 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 SPATA2LQ8IUW3 424 aaPredicted RBP19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 GLYCTKQ8IVS8 523 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 RNF214Q8ND24 703 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 SDCBP2Q9H190 292 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.07■□□□□ 0.642e-6■■■■■ 149.1
SSSCA1-201ENST00000309328 MAN1C1Q9NR34 630 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 CLDND1Q9NY35 253 aa19.07■□□□□ 0.64
SSSCA1-201ENST00000309328 VWA8A3KMH1 1905 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 MTMR11A4FU01 709 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 LRRN2O75325 713 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 PAEPP09466 180 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 CD58P19256 250 aa19.06■□□□□ 0.64
SSSCA1-201ENST00000309328 ACAT1P24752 427 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms