RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 DCAF15Q66K64 600 aa20.1■□□□□ 0.81
BPTF-201ENST00000306378 TRIM65Q6PJ69 517 aa20.1■□□□□ 0.81
BPTF-201ENST00000306378 NSMFQ6X4W1 530 aa20.1■□□□□ 0.81
BPTF-201ENST00000306378 SPATA16Q9BXB7 569 aa20.1■□□□□ 0.81
BPTF-201ENST00000306378 LRRC6Q86X45 466 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 MSL3Q8N5Y2 521 aaKnown RBP20.09■□□□□ 0.81
BPTF-201ENST00000306378 SH3BP4Q9P0V3 963 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 PAK5Q9P286 719 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 ABCB11O95342 1321 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 SHROOM1Q2M3G4 852 aaPredicted RBP20.09■□□□□ 0.81
BPTF-201ENST00000306378 A0A0B4J269 797 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 TIMM10P62072 90 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 TUBB3Q13509 450 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 SNX30Q5VWJ9 437 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 SNX13Q9Y5W8 968 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 hCG_1642624A0A1W2PR95 340 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 USP27XA6NNY8 438 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 ZNF618Q5T7W0 954 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 ZIM3Q96PE6 472 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 COPRSQ9NQ92 184 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 ASAP1Q9ULH1 1129 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 MIGA2Q7L4E1 593 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 JMJD4Q9H9V9 463 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 TOP3AQ13472 1001 aaPredicted RBP20.09■□□□□ 0.81
BPTF-201ENST00000306378 CCDC144BQ3MJ40 725 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 PKN3Q6P5Z2 889 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 RNPEPL1Q9HAU8 725 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 COMMD8Q9NX08 183 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 DENND4BO75064 1496 aaPredicted RBP20.09■□□□□ 0.81
BPTF-201ENST00000306378 FAM98BQ52LJ0 330 aaKnown RBP20.09■□□□□ 0.81
BPTF-201ENST00000306378 MINDY2Q8NBR6 621 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 CAPSLQ8WWF8 208 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 PRR23CQ6ZRP0 262 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 JARID2Q92833 1246 aaPredicted RBP20.09■□□□□ 0.81
BPTF-201ENST00000306378 SPATA17Q96L03 361 aa20.09■□□□□ 0.81
BPTF-201ENST00000306378 FASP25445 335 aa20.08■□□□□ 0.81
BPTF-201ENST00000306378 HSD17B4P51659 736 aa20.08■□□□□ 0.81
BPTF-201ENST00000306378 CDK17Q00537 523 aa20.08■□□□□ 0.81
BPTF-201ENST00000306378 LONRF1Q17RB8 773 aa20.08■□□□□ 0.81
BPTF-201ENST00000306378 CYLDQ9NQC7 956 aa20.08■□□□□ 0.81
BPTF-201ENST00000306378 DMTF1Q9Y222 760 aa20.08■□□□□ 0.81
BPTF-201ENST00000306378 MATN2O00339 956 aa20.08■□□□□ 0.81
BPTF-201ENST00000306378 TLR2O60603 784 aa20.08■□□□□ 0.81
BPTF-201ENST00000306378 TRAP1Q12931 704 aaKnown RBP20.08■□□□□ 0.81
BPTF-201ENST00000306378 TGFBRAP1Q8WUH2 860 aa20.08■□□□□ 0.81
BPTF-201ENST00000306378 TIPINQ9BVW5 301 aa20.08■□□□□ 0.81
BPTF-201ENST00000306378 PRKAA2P54646 552 aa20.08■□□□□ 0.81
BPTF-201ENST00000306378 ATP13A5Q4VNC0 1218 aa20.08■□□□□ 0.81
BPTF-201ENST00000306378 PTPRN2Q92932 1015 aa20.08■□□□□ 0.81
BPTF-201ENST00000306378 STK4Q13043 487 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 KNOP1Q1ED39 458 aaKnown RBP20.08■□□□□ 0.8
BPTF-201ENST00000306378 PPIL6Q8IXY8 311 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 XPO7Q9UIA9 1087 aaKnown RBP20.08■□□□□ 0.8
BPTF-201ENST00000306378 CD109Q6YHK3 1445 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 UBE2QL1A1L167 161 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 AP1G2O75843 785 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 KLHL18O94889 574 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 PTGS2P35354 604 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 KRT24Q2M2I5 525 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 SEL1L3Q68CR1 1132 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 EEF2KMTQ96G04 330 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 RBM12Q9NTZ6 932 aaKnown RBP20.08■□□□□ 0.8
BPTF-201ENST00000306378 TMCC3Q9ULS5 477 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 VPS4BO75351 444 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 ZNF12P17014 697 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 KCNF1Q9H3M0 494 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 NCKAP5LQ9HCH0 1330 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 SKIV2L2P42285 1042 aaKnown RBP20.08■□□□□ 0.8
BPTF-201ENST00000306378 C16orf62Q7Z3J2 963 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 MSTO1Q9BUK6 570 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 BAIAP2Q9UQB8 552 aa20.08■□□□□ 0.8
BPTF-201ENST00000306378 CASP5P51878 434 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 JAMLQ86YT9 394 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 TCAIMQ8N3R3 496 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 KCTD17Q8N5Z5 321 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 PDPRQ8NCN5 879 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 FAM167AQ96KS9 214 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 MYLK2Q9H1R3 596 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 NGRNQ9NPE2 291 aaKnown RBP20.07■□□□□ 0.8
BPTF-201ENST00000306378 FTLP02792 175 aaPredicted RBP20.07■□□□□ 0.8
BPTF-201ENST00000306378 MSL3P1P0C860 447 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 ATF6P18850 670 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 ITFG2Q969R8 447 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 EIF6P56537 245 aaKnown RBP20.07■□□□□ 0.8
BPTF-201ENST00000306378 MZT2AQ6P582 158 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 TTC23LQ6PF05 361 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 TBCKQ8TEA7 893 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 MYL12AP19105 171 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 CASP4P49662 377 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 EXOC3L1Q86VI1 746 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 RBM46Q8TBY0 533 aaKnown RBP20.07■□□□□ 0.8
BPTF-201ENST00000306378 HAVCR1Q96D42 359 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 BTBD10Q9BSF8 475 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 PCMTD2Q9NV79 361 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 CPSF1Q10570 1443 aaKnown RBP20.07■□□□□ 0.8
BPTF-201ENST00000306378 PNMA6FA0A0J9YX94 578 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 ZBTB39O15060 712 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 CRKP46108 304 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 RGS4P49798 205 aa20.07■□□□□ 0.8
BPTF-201ENST00000306378 RASA2Q15283 850 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms