RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 KCNT1Q5JUK3 1230 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 IFNL1Q8IU54 200 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.06□□□□□ -0.48
SCG2-201ENST00000305409 GCOM2Q9BZD3 368 aaPredicted RBP12.06□□□□□ -0.48
SCG2-201ENST00000305409 SYNCQ9H7C4 482 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 GOLGA2P5Q9HBQ8 144 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 PIN4Q9Y237 131 aaKnown RBP12.06□□□□□ -0.48
SCG2-201ENST00000305409 SNX9Q9Y5X1 595 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 TRIP12Q14669 1992 aaPredicted RBP12.06□□□□□ -0.48
SCG2-201ENST00000305409 M0QYV0 167 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 CILPO75339 1184 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 GRAP2O75791 330 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 MICAL2O94851 1124 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 ERBB2P04626 1255 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 ATF7P17544 494 aaPredicted RBP12.06□□□□□ -0.48
SCG2-201ENST00000305409 CAPN2P17655 700 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 PSEN2P49810 448 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 PSMC1P62191 440 aaKnown RBP12.06□□□□□ -0.48
SCG2-201ENST00000305409 PTPN11Q06124 597 aaPredicted RBP12.06□□□□□ -0.48
SCG2-201ENST00000305409 PPP1R7Q15435 360 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 ALS2CLQ60I27 953 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 C17orf99Q6UX52 265 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 ZDHHC24Q6UX98 284 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 TMC3Q7Z5M5 1100 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 RHOT1Q8IXI2 618 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 CCDC114Q96M63 670 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 FMO2Q99518 471 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 MRPL45Q9BRJ2 306 aaKnown RBP12.06□□□□□ -0.48
SCG2-201ENST00000305409 TRIM6Q9C030 488 aaPredicted RBP12.06□□□□□ -0.48
SCG2-201ENST00000305409 RAB17Q9H0T7 212 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 ASB7Q9H672 318 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 ZWILCHQ9H900 591 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 FAM49BQ9NUQ9 324 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 GRHL1Q9NZI5 618 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 BCCIPQ9P287 314 aaKnown RBP eCLIP12.06□□□□□ -0.48
SCG2-201ENST00000305409 CACNG4Q9UBN1 327 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 CEP83Q9Y592 693 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 SCINQ9Y6U3 715 aa12.06□□□□□ -0.48
SCG2-201ENST00000305409 TULP2O00295 520 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 FSCN2O14926 492 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 C6orf222P0C671 652 aaPredicted RBP12.05□□□□□ -0.48
SCG2-201ENST00000305409 CYP3A5P20815 502 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 SLC1A1P43005 524 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 RGS7P49802 495 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 RAB6CQ53S08 254 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 RGMBQ6NW40 437 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 CCDC25Q86WR0 208 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 SEC14L1Q92503 715 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 RAPGEF5Q92565 580 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 TMEM176AQ96HP8 235 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 PIWIL1Q96J94 861 aaKnown RBP12.05□□□□□ -0.48
SCG2-201ENST00000305409 VCPIP1Q96JH7 1222 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 PWWP2AQ96N64 755 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 SH3GL2Q99962 352 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 RAB6CQ9H0N0 254 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 FAM114A2Q9NRY5 505 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 ZDHHC18Q9NUE0 388 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.05□□□□□ -0.48
SCG2-201ENST00000305409 NRCAMQ92823 1304 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 TCRBV5S1A1TA0A578 114 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 RRN3P2A6NIE6 340 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 RECQL4O94761 1208 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 PGK1P00558 417 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 CALB1P05937 261 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 IGFBP6P24592 240 aaPredicted RBP12.05□□□□□ -0.48
SCG2-201ENST00000305409 TRIM32Q13049 653 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 DHX34Q14147 1143 aaKnown RBP12.05□□□□□ -0.48
SCG2-201ENST00000305409 MFSD7Q6UXD7 560 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 ACOT1Q86TX2 421 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 ZNF410Q86VK4 478 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 FAM76AQ8TAV0 307 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 EXOC4Q96A65 974 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 OSBPL8Q9BZF1 889 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 METTL5Q9NRN9 209 aaKnown RBP12.05□□□□□ -0.48
SCG2-201ENST00000305409 SAE1Q9UBE0 346 aaPredicted RBP12.05□□□□□ -0.48
SCG2-201ENST00000305409 PARP2Q9UGN5 583 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 PCYOX1Q9UHG3 505 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 NME7Q9Y5B8 376 aa12.05□□□□□ -0.48
SCG2-201ENST00000305409 TRIP11Q15643 1979 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 ANK1P16157 1881 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 SMIM23A6NLE4 172 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 KRT1P04264 644 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 DARSP14868 501 aaKnown RBP12.04□□□□□ -0.48
SCG2-201ENST00000305409 EIF4BP23588 611 aaKnown RBP12.04□□□□□ -0.48
SCG2-201ENST00000305409 RBP5P82980 135 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 KRT17Q04695 432 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 SH3PXD2AQ5TCZ1 1133 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 CHADLQ6NUI6 762 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 MREGQ8N565 214 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 TRPV1Q8NER1 839 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 AP5M1Q9H0R1 490 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 C10orf88Q9H8K7 445 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 ASIC3Q9UHC3 531 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 PCSK1NQ9UHG2 260 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 IP6K2Q9UHH9 426 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 RASAL2Q9UJF2 1139 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 PCDHGC3Q9UN70 934 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 FAM187AA6NFU0 413 aa12.04□□□□□ -0.48
SCG2-201ENST00000305409 MANSC4A6NHS7 340 aaPredicted RBP12.04□□□□□ -0.48
SCG2-201ENST00000305409 OPA1O60313 960 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms