RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CYP26A1O43174 497 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 PPP1R37O75864 691 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 CCND1P24385 295 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 ETFBP38117 255 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 LMBRD2Q68DH5 695 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-201ENST00000302528 POMGNT2Q8NAT1 580 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 SGSM3Q96HU1 749 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 LXNQ9BS40 222 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 COA1Q9GZY4 146 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 DNAJC5Q9H3Z4 198 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 ERAP1Q9NZ08 941 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 SLC39A10Q9ULF5 831 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 ATF5Q9Y2D1 282 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-201ENST00000302528 SNX9Q9Y5X1 595 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 FAM47DPA6NHR8 397 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 TRPC5OSA6NMA1 111 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 ZBTB39O15060 712 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 POTEIP0CG38 1075 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 CASP1P29466 404 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 TTLL9Q3SXZ7 439 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 TYW3Q6IPR3 259 aaKnown RBP10.81□□□□□ -0.68
CLIP1-201ENST00000302528 POTEGQ6S5H5 508 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 PI16Q6UXB8 463 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 UNC45BQ8IWX7 931 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 MIER2Q8N344 545 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 ZNF473Q8WTR7 871 aaKnown RBP10.81□□□□□ -0.68
CLIP1-201ENST00000302528 CATSPERBQ9H7T0 1116 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 RMND5AQ9H871 391 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 CHMP2BQ9UQN3 213 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 NEU2Q9Y3R4 380 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 DNALI1O14645 258 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-201ENST00000302528 CNOT3O75175 753 aaKnown RBP10.81□□□□□ -0.68
CLIP1-201ENST00000302528 SARSP49591 514 aaKnown RBP10.81□□□□□ -0.68
CLIP1-201ENST00000302528 EFNA5P52803 228 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 PLIN5Q00G26 463 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 ZNF618Q5T7W0 954 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 UGT3A1Q6NUS8 523 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 CENPLQ8N0S6 344 aaPredicted RBP10.81□□□□□ -0.68
CLIP1-201ENST00000302528 FOXP3Q9BZS1 431 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 UBXN6Q9BZV1 441 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 WDR35Q9P2L0 1181 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 GRID1Q9ULK0 1009 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 SMIM31A0A1B0GVY4 71 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 CLTBP09497 229 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 RARBP10826 455 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 JAK1P23458 1154 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 KRT20P35900 424 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 CACNB3P54284 484 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 EDRF1Q3B7T1 1238 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 DGKKQ5KSL6 1271 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 SIRT2Q8IXJ6 389 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 RNF149Q8NC42 400 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 OSBP2Q969R2 916 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 NARS2Q96I59 477 aaKnown RBP10.81□□□□□ -0.68
CLIP1-201ENST00000302528 CAMKK2Q96RR4 588 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 SENP7Q9BQF6 1050 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 EPS8L2Q9H6S3 715 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 DLGAP2Q9P1A6 1054 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 HPS5Q9UPZ3 1129 aa10.81□□□□□ -0.68
CLIP1-201ENST00000302528 SHROOM2Q13796 1616 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 UPP2O95045 317 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 PRKCBP05771 671 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 NFICP08651 508 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 ADI1Q9BV57 179 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 SLAIN2Q9P270 581 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 DYTNA2CJ06 578 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 PRR23AA6NEV1 266 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 HSMCR30P0CW71 290 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 C1DQ13901 141 aaKnown RBP10.8□□□□□ -0.68
CLIP1-201ENST00000302528 SGSM1Q2NKQ1 1148 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 TTC39BQ5VTQ0 682 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-201ENST00000302528 CDH24Q86UP0 819 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 VTA1Q9NP79 307 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 DBR1Q9UK59 544 aaKnown RBP10.8□□□□□ -0.68
CLIP1-201ENST00000302528 MYO3BQ8WXR4 1341 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 LAMC1P11047 1609 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 KIF1BO60333 1816 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 USP17L10C9JJH3 530 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 SNRPAP09012 282 aaKnown RBP10.8□□□□□ -0.68
CLIP1-201ENST00000302528 ITIH2P19823 946 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 CAMK2GQ13555 558 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-201ENST00000302528 RAET1EQ8TD07 263 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 HIC2Q96JB3 615 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 C9orf72Q96LT7 481 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 PACSIN1Q9BY11 444 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 ROGDIQ9GZN7 287 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.8□□□□□ -0.68
CLIP1-201ENST00000302528 STAP2Q9UGK3 403 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 MORC2Q9Y6X9 1032 aaPredicted RBP10.8□□□□□ -0.68
CLIP1-201ENST00000302528 NT5C2P49902 561 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 NUDT2P50583 147 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 MRPS35P82673 323 aaKnown RBP10.8□□□□□ -0.68
CLIP1-201ENST00000302528 RBP5P82980 135 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 CHRNB3Q05901 458 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 STX5Q13190 355 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 MGAT5BQ3V5L5 792 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 IRAK1BP1Q5VVH5 260 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 PPP1R18Q6NYC8 613 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 EPHX4Q8IUS5 362 aa10.8□□□□□ -0.68
CLIP1-201ENST00000302528 TTLL6Q8N841 843 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms