RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 RDM1Q8NG50 284 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 NEDD1Q8NHV4 660 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 LPAR1Q92633 364 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 TMBIM4Q9HC24 238 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 RAB6BQ9NRW1 208 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 TMEM161AQ9NX61 479 aa7.96□□□□□ -1.13
SF3B3-201ENST00000302516 CLRN2A0PK11 232 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 IQCA1LA6NCM1 817 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 ZC3H11AO75152 810 aaKnown RBP eCLIP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 NCOA4Q13772 614 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 NAPEPLDQ6IQ20 393 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 GTF3C2Q8WUA4 911 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 TRAPPC9Q96Q05 1148 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 LRCH1Q9Y2L9 728 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 AIM2O14862 343 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 ECM2O94769 699 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 CD4P01730 458 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 STIP1P31948 543 aaKnown RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 HPCAP84074 193 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 GTF2H3Q13889 308 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 QRICH1Q2TAL8 776 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 LZTS1Q9Y250 596 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 INPP5FQ9Y2H2 1132 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 UBA6A0AVT1 1052 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 PDZK1P1A8MUH7 402 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 TK2O00142 265 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 EEF2KO00418 725 aaKnown RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 TRAPPC3O43617 180 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 TKTP29401 623 aaKnown RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 SBK1Q52WX2 424 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 C6orf10Q5SRN2 563 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 BNC2Q6ZN30 1099 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 CROCCP3Q8IVE0 287 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 PDCD6IPQ8WUM4 868 aaKnown RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 TFB1MQ8WVM0 346 aaKnown RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 CASP10Q92851 521 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 SH3KBP1Q96B97 665 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 WNK4Q96J92 1243 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 SLC24A2Q9UI40 661 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 MYO10Q9HD67 2058 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 FMN2Q9NZ56 1722 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 USP17L10C9JJH3 530 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 NDUFS3O75489 264 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 TARSP26639 723 aaKnown RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 ADORA2BP29275 332 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 FBXW4P57775 412 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 NWD1Q149M9 1564 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 AGAP9Q5VTM2 703 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 RBM43Q6ZSC3 357 aaKnown RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 TMEM51Q9NW97 253 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 H2AFY2Q9P0M6 372 aaPredicted RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 WEE2P0C1S8 567 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 PDK2Q15119 407 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 PAPD7Q5XG87 772 aaKnown RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 UNC45BQ8IWX7 931 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 DBR1Q9UK59 544 aaKnown RBP7.96□□□□□ -1.14
SF3B3-201ENST00000302516 GTF3C4Q9UKN8 822 aa7.96□□□□□ -1.14
SF3B3-201ENST00000302516 SRRM3A6NNA2 597 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-201ENST00000302516 GAS2O43903 313 aaKnown RBP7.95□□□□□ -1.14
SF3B3-201ENST00000302516 IGKV5-2P06315 115 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 PRKAA2P54646 552 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 Q3C1V9 767 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 TRIM8Q9BZR9 551 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 RMND5AQ9H871 391 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 FAM217BQ9NTX9 383 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-201ENST00000302516 FHOD1Q9Y613 1164 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 USP31Q70CQ4 1352 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 USP10Q14694 798 aaKnown RBP7.95□□□□□ -1.14
SF3B3-201ENST00000302516 KIF12Q96FN5 646 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 CHP1Q99653 195 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 REEP2Q9BRK0 252 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 FUT8Q9BYC5 575 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 IMPAD1Q9NX62 359 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 STARD13Q9Y3M8 1113 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 TMEM94Q12767 1356 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 UBTFL6P0CB48 400 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-201ENST00000302516 SLC2A3P11169 496 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 TNFRSF8P28908 595 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 PTPN4P29074 926 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 NCF4Q15080 339 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 TFDP3Q5H9I0 405 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 SPDYAQ5MJ70 313 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 C4orf33Q8N1A6 199 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 SPATA33Q96N06 139 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 CTNNAL1Q9UBT7 734 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 TRIM24O15164 1050 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 NCKAP1LP55160 1127 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 TRIM71Q2Q1W2 868 aaKnown RBP7.95□□□□□ -1.14
SF3B3-201ENST00000302516 PID1Q7Z2X4 250 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 LRRC6Q86X45 466 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 P3H2Q8IVL5 708 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 ST13P5Q8NFI4 369 aaPredicted RBP7.95□□□□□ -1.14
SF3B3-201ENST00000302516 ATXN2LQ8WWM7 1075 aaKnown RBP7.95□□□□□ -1.14
SF3B3-201ENST00000302516 EFCAB1Q9HAE3 211 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 KIF1AQ12756 1690 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 ASB14A6NK59 587 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 CAND2O75155 1236 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 SOAT2O75908 522 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 ANXA9O76027 345 aa7.95□□□□□ -1.14
SF3B3-201ENST00000302516 TNFAIP8O95379 198 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms