RNA–Protein interactions for RNA: ENST00000300107.7

CLPX-201, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPX, Length 4,695 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-201ENST00000300107 SCFD1Q8WVM8 642 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 INPP5DQ92835 1189 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 TMEM143Q96AN5 459 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 TSPAN17Q96FV3 270 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 SPHKAPQ2M3C7 1700 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 AK9Q5TCS8 1911 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 FKBP6O75344 327 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 STAT5BP51692 787 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 ARHGEF6Q15052 776 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 KYAT1Q16773 422 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 WASHC2DQ5SRD0 308 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 C2orf69Q8N8R5 385 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 ATXN2LQ8WWM7 1075 aaKnown RBP13.37□□□□□ -0.27
CLPX-201ENST00000300107 CNBD2Q96M20 576 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 SEPT3Q9UH03 358 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 SLC24A2Q9UI40 661 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 LRFN2Q9ULH4 789 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 PRR12Q9ULL5 1215 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 TSC22D4Q9Y3Q8 395 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 CCDC78A2IDD5 438 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 PSMD3O43242 534 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 TBC1D4O60343 1298 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 MOCS2O96007 188 aaPredicted RBP13.37□□□□□ -0.27
CLPX-201ENST00000300107 GTF2H1P32780 548 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 S100A5P33763 92 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 TSPY1Q01534 308 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 AASDHQ4L235 1098 aaPredicted RBP13.37□□□□□ -0.27
CLPX-201ENST00000300107 ZC3H12BQ5HYM0 836 aaKnown RBP13.37□□□□□ -0.27
CLPX-201ENST00000300107 ASAP3Q8TDY4 903 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 CNDP1Q96KN2 507 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 ILKAPQ9H0C8 392 aaPredicted RBP13.37□□□□□ -0.27
CLPX-201ENST00000300107 GID8Q9NWU2 228 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 NAALADL1Q9UQQ1 740 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 LRCH1Q9Y2L9 728 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 PTPRUQ92729 1446 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 LRRC10BA6NIK2 292 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 ZBTB39O15060 712 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 TRAPPC3O43617 180 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 TMCC1O94876 653 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 CAMTA2O94983 1202 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 SGPL1O95470 568 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 RBP5P82980 135 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 PLOD1Q02809 727 aaPredicted RBP13.37□□□□□ -0.27
CLPX-201ENST00000300107 ITPK1Q13572 414 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 TRMT5Q32P41 509 aaKnown RBP13.37□□□□□ -0.27
CLPX-201ENST00000300107 FBXO33Q7Z6M2 555 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 TSEN2Q8NCE0 465 aaKnown RBP13.37□□□□□ -0.27
CLPX-201ENST00000300107 DDHD1Q8NEL9 900 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 ZNF560Q96MR9 790 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 CEMIPQ8WUJ3 1361 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 JCADQ9P266 1359 aa13.37□□□□□ -0.27
CLPX-201ENST00000300107 HNRNPCL2B2RXH8 293 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 PJA2O43164 708 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 NFKBIAP25963 317 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 CACNA2D1P54289 1103 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 RASA2Q15283 850 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 IZUMO2Q6UXV1 221 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 FBXO36Q8NEA4 188 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 NIF3L1Q9GZT8 377 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 ARHGEF38Q9NXL2 777 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 NSMCE4AQ9NXX6 385 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 E2F8A0AVK6 867 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 ZBTB24O43167 697 aaPredicted RBP13.36□□□□□ -0.27
CLPX-201ENST00000300107 STRNO43815 780 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 GRAP2O75791 330 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 CLPTM1O96005 669 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 CCDC159P0C7I6 412 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 THRAP10827 490 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 HMGCS2P54868 508 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 MXD4Q14582 209 aaPredicted RBP13.36□□□□□ -0.27
CLPX-201ENST00000300107 BOLA3Q53S33 107 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 LAYNQ6UX15 382 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 MSL3Q8N5Y2 521 aaKnown RBP13.36□□□□□ -0.27
CLPX-201ENST00000300107 ZNF669Q96BR6 464 aaPredicted RBP13.36□□□□□ -0.27
CLPX-201ENST00000300107 TEX12Q9BXU0 123 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 C10orf88Q9H8K7 445 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 ATP11BQ9Y2G3 1177 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 SNX9Q9Y5X1 595 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 DFFAO00273 331 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 CES2O00748 559 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 ATP9AO75110 1047 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 LAMB3Q13751 1172 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 PDK1Q15118 436 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 CCDC85BQ15834 202 aaPredicted RBP13.36□□□□□ -0.27
CLPX-201ENST00000300107 SNX30Q5VWJ9 437 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 TMCO5AQ8N6Q1 288 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 LINC00116Q8NCU8 138 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 USP6NLQ92738 828 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 PGM2Q96G03 612 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 SPON2Q9BUD6 331 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.36□□□□□ -0.27
CLPX-201ENST00000300107 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.36□□□□□ -0.27
CLPX-201ENST00000300107 PCDHGB4Q9UN71 923 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 AP4S1Q9Y587 144 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 POLRMTO00411 1230 aaKnown RBP13.36□□□□□ -0.27
CLPX-201ENST00000300107 RIPK2O43353 540 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 R3HDM1Q15032 1099 aaKnown RBP13.36□□□□□ -0.27
CLPX-201ENST00000300107 SEC23AQ15436 765 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 RBBP7Q16576 425 aa13.36□□□□□ -0.27
CLPX-201ENST00000300107 MEA1Q16626 185 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms