RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CGRRF1Q99675 332 aa25.72■■□□□ 1.71
SPTSSA-201ENST00000298130 CHKBQ9Y259 395 aa25.72■■□□□ 1.71
SPTSSA-201ENST00000298130 A0A0B4J269 797 aa25.72■■□□□ 1.71
SPTSSA-201ENST00000298130 CD48P09326 243 aa25.72■■□□□ 1.71
SPTSSA-201ENST00000298130 KCNA3P22001 575 aa25.72■■□□□ 1.71
SPTSSA-201ENST00000298130 TFDP1Q14186 410 aa25.72■■□□□ 1.71
SPTSSA-201ENST00000298130 MTMR14Q8NCE2 650 aa25.72■■□□□ 1.71
SPTSSA-201ENST00000298130 PORCNQ9H237 461 aa25.72■■□□□ 1.71
SPTSSA-201ENST00000298130 SRGAP2CP0DJJ0 459 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 MARK3P27448 753 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 CETN2P41208 172 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 RAP1GAPP47736 663 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 TRIM72Q6ZMU5 477 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 SLC7A3Q8WY07 619 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 ZBTB10Q96DT7 871 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 SMC6Q96SB8 1091 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 PCSK1NQ9UHG2 260 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 hCG_1818297A0A087WSY0 165 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 TCRBV7S3A2A0A539 114 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 OVGP1Q12889 678 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 NAA25Q14CX7 972 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 CIAPIN1Q6FI81 312 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 ASRGL1Q7L266 308 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 RBM41Q96IZ5 413 aaKnown RBP25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 WRNIP1Q96S55 665 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 LBHD1Q9BQE6 289 aaPredicted RBP25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 CISHQ9NSE2 258 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 NXF1Q9UBU9 619 aaKnown RBP25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 AGTPBP1Q9UPW5 1226 aa25.71■■□□□ 1.71
SPTSSA-201ENST00000298130 CBX6O95503 412 aa25.7■■□□□ 1.71
SPTSSA-201ENST00000298130 OATP04181 439 aa25.7■■□□□ 1.71
SPTSSA-201ENST00000298130 KRT4P19013 534 aa25.7■■□□□ 1.71
SPTSSA-201ENST00000298130 RFC1P35251 1148 aaPredicted RBP25.7■■□□□ 1.71
SPTSSA-201ENST00000298130 GPX6P59796 221 aa25.7■■□□□ 1.71
SPTSSA-201ENST00000298130 TFAMQ00059 246 aaKnown RBP25.7■■□□□ 1.71
SPTSSA-201ENST00000298130 CAPSQ13938 189 aa25.7■■□□□ 1.71
SPTSSA-201ENST00000298130 FNBP1LQ5T0N5 605 aa25.7■■□□□ 1.71
SPTSSA-201ENST00000298130 RNASEH2BQ5TBB1 312 aaKnown RBP25.7■■□□□ 1.71
SPTSSA-201ENST00000298130 TLDC1Q6P9B6 456 aa25.7■■□□□ 1.71
SPTSSA-201ENST00000298130 REPS2Q8NFH8 660 aa25.7■■□□□ 1.71
SPTSSA-201ENST00000298130 JOSD2Q8TAC2 188 aa25.7■■□□□ 1.71
SPTSSA-201ENST00000298130 CEP83Q9Y592 693 aa25.7■■□□□ 1.71
SPTSSA-201ENST00000298130 TAF5Q15542 800 aa25.7■■□□□ 1.7
SPTSSA-201ENST00000298130 DENND1AQ8TEH3 1009 aa25.7■■□□□ 1.7
SPTSSA-201ENST00000298130 L3MBTL3Q96JM7 780 aaPredicted RBP25.7■■□□□ 1.7
SPTSSA-201ENST00000298130 IMPG2Q9BZV3 1241 aa25.7■■□□□ 1.7
SPTSSA-201ENST00000298130 STYXL1Q9Y6J8 313 aa25.7■■□□□ 1.7
SPTSSA-201ENST00000298130 CD19P15391 556 aa25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 IL1R2P27930 398 aa25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 RTP1P59025 263 aa25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 LVRNQ6Q4G3 990 aa25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 GBP7Q8N8V2 638 aaPredicted RBP25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 ACTL9Q8TC94 416 aa25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 HACL1Q9UJ83 578 aa25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 VCPP55072 806 aaKnown RBP25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 TGFB2P61812 414 aa25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 OTUD4Q01804 1114 aaKnown RBP25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 RIPK1Q13546 671 aa25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 KIAA0319LQ8IZA0 1049 aa25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 VCPIP1Q96JH7 1222 aa25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 DCTN4Q9UJW0 460 aa25.69■■□□□ 1.7
SPTSSA-201ENST00000298130 SPATA31C2B4DYI2 1134 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 PIK3R2O00459 728 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 DKC1O60832 514 aaKnown RBP eCLIP25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 UNC5CO95185 931 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 GJB1P08034 283 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 CDKN2BP42772 138 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 SPARCL1Q14515 664 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 OASLQ15646 514 aaKnown RBP25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 TFDP3Q5H9I0 405 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 DHX33Q9H6R0 707 aaKnown RBP25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 WDR81Q562E7 1941 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 TBXAS1P24557 533 aaPredicted RBP25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 ADRA1DP25100 572 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 CTCFP49711 727 aaPredicted RBP25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 RNF43Q68DV7 783 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 DPH6Q7L8W6 267 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 RHPN2Q8IUC4 686 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 CEP120Q8N960 986 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 LRRC8CQ8TDW0 803 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 POLIQ9UNA4 740 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 GJA3Q9Y6H8 435 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 NUMBLQ9Y6R0 609 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 CLUHO75153 1309 aa25.68■■□□□ 1.7
SPTSSA-201ENST00000298130 MAFGO15525 162 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 CST8O60676 142 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 NAMPTP43490 491 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 MKRN3Q13064 507 aaKnown RBP25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 HHATQ5VTY9 493 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 DENND1BQ6P3S1 775 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 RELL1Q8IUW5 271 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 THNSL1Q8IYQ7 743 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 LRRC71Q8N4P6 559 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 NPHS2Q9NP85 383 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 C15orf41Q9Y2V0 281 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 PSMA2P25787 234 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 ARL2P36404 184 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 CDH8P55286 799 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 ARFGAP1Q8N6T3 406 aa25.67■■□□□ 1.7
SPTSSA-201ENST00000298130 ZNF280CQ8ND82 737 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms