RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 FAM153BP0C7A2 387 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 NFIAQ12857 509 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 FAM153CQ494X1 144 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 C16orf87Q6PH81 154 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 CBWD2Q8IUF1 395 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 YAF2Q8IY57 180 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 NIF3L1Q9GZT8 377 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 ABCF3Q9NUQ8 709 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 FBXO28Q9NVF7 368 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 PRMT7Q9NVM4 692 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 WHRNQ9P202 907 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 FAM153AQ9UHL3 310 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 MAP2K7O14733 419 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 BRD2P25440 801 aaKnown RBP16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 CYTH1Q15438 398 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 C2CD6Q53TS8 623 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 TTC39BQ5VTQ0 682 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 GRAMD4Q6IC98 578 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 FOXR1Q6PIV2 292 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 PRDM4Q9UKN5 801 aa16.78■□□□□ 0.28
ARHGEF28-201ENST00000296794 PSTPIP1O43586 416 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 BACE1P56817 501 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 STILQ15468 1287 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 CYP4A22Q5TCH4 519 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 SLC30A9Q6PML9 568 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 E2F7Q96AV8 911 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 CBWD1Q9BRT8 395 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 PPP2R3BQ9Y5P8 575 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 DNAJC6O75061 913 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 CYP11B1P15538 503 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 OCA2Q04671 838 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 MEA1Q16626 185 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 SH3RF1Q7Z6J0 888 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 C1orf131Q8NDD1 294 aaKnown RBP16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 ZC3H15Q8WU90 426 aaKnown RBP16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 KCNK16Q96T55 309 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 NWD1Q149M9 1564 aa16.77■□□□□ 0.28
ARHGEF28-201ENST00000296794 A0A0U1RQJ8 604 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 FAM237AA0A1B0GTK4 181 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 KLHL2O95198 593 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 ICAM1P05362 532 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 SULT1E1P49888 294 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 MRPS35P82673 323 aaKnown RBP16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 TMEM132DQ14C87 1099 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 APPL2Q8NEU8 664 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 SLC20A1Q8WUM9 679 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 GPRASP2Q96D09 838 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 MAGEB18Q96M61 343 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 INTS13Q9NVM9 706 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 AIPL1Q9NZN9 384 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 AARSP49588 968 aaKnown RBP eCLIP16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 CTCFP49711 727 aaPredicted RBP16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 KCNMA1Q12791 1236 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 TRIP10Q15642 601 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 ACCSLQ4AC99 568 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 PRPF39Q86UA1 669 aaKnown RBP16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 CREG2Q8IUH2 290 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 DDIASQ8IXT1 998 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 TARS2Q9BW92 718 aaKnown RBP16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 KDM4CQ9H3R0 1056 aa16.77■□□□□ 0.27
ARHGEF28-201ENST00000296794 ENO3P13929 434 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 SREBF1P36956 1147 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 TPI1P60174 286 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 FAM117BQ6P1L5 589 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 RDM1Q8NG50 284 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 RMDN2Q96LZ7 410 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 PPME1Q9Y570 386 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 SNX5Q9Y5X3 404 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 hCG_2014768A0A024R1R8 64 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 LRRC10BA6NIK2 292 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 CD4P01730 458 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 GZMAP12544 262 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 BMP6P22004 513 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 PTENP60484 403 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 ERVK-9P63128 1117 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 CHI3L2Q15782 390 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 PLEKHH3Q7Z736 793 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 ACER1Q8TDN7 264 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 MROH8Q9H579 483 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 GPRC5CQ9NQ84 441 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 DDX20Q9UHI6 824 aaKnown RBP16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 HAO1Q9UJM8 370 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 TRIM49D1C9J1S8 452 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 DFFAO00273 331 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 ATXN8OSP0DMR3 200 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 TMEM62Q0P6H9 643 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 CUL2Q13617 745 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 ARID3BQ8IVW6 561 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 NEURL4Q96JN8 1562 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 DDX50Q9BQ39 737 aaKnown RBP16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 RIOX1Q9H6W3 641 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 TJP2Q9UDY2 1190 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 MST1RQ04912 1400 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 SYCE1LA8MT33 242 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 IRX1P78414 480 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 EFCAB12Q6NXP0 572 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 NLRP9Q7RTR0 991 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 ASIC4Q96FT7 647 aa16.76■□□□□ 0.27
ARHGEF28-201ENST00000296794 PNMA5Q96PV4 448 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms