RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 ADNPQ9H2P0 1102 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PIH1D3Q9NQM4 214 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ABHD10Q9NUJ1 306 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 KANSL3Q9P2N6 904 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CNOT7Q9UIV1 285 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 RAB23Q9ULC3 237 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CYP2D7A0A087X1C5 515 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 WDR91A4D1P6 747 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SLC9A3R1O14745 358 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 KLHL2O95198 593 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PRDX5P30044 214 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PIK3CGP48736 1102 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF135P52742 658 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 EPHB3P54753 998 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CUL3Q13618 768 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CCDC85BQ15834 202 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 HIPK4Q8NE63 616 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 MOSPD2Q8NHP6 518 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 DDI1Q8WTU0 396 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 FAM151AQ8WW52 585 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 HPS3Q969F9 1004 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 GJD4Q96KN9 370 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ATP6V1G3Q96LB4 118 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 TBCBQ99426 244 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CLPBQ9H078 707 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ETNK1Q9HBU6 452 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 RAD18Q9NS91 495 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CDYLQ9Y232 598 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ICE1Q9Y2F5 2266 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SOWAHDA6NJG2 315 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PHF20L1A8MW92 1017 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 IFRD1O00458 451 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 LZTS3O60299 673 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PRKCEQ02156 737 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 C2orf54Q08AI8 447 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CUL4AQ13619 759 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ITGA9Q13797 1035 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SLC9A5Q14940 896 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 VPS72Q15906 364 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SUSD4Q5VX71 490 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 FAM45BPQ6NSW5 357 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 P3H2Q8IVL5 708 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CCDC60Q8IWA6 550 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 DYDC2Q96IM9 177 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 TSC22D3Q99576 134 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 OLFM1Q99784 485 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 EIF2AK1Q9BQI3 630 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PLA2G12BQ9BX93 195 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 MOV10L1Q9BXT6 1211 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 TAF1DQ9H5J8 278 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SCUBE2Q9NQ36 999 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CTNNAL1Q9UBT7 734 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SLC39A10Q9ULF5 831 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 TMCC3Q9ULS5 477 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 EIF3LQ9Y262 564 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ROBO2Q9HCK4 1378 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PJA2O43164 708 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 TRIM49P0CI25 452 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 TRIM49CP0CI26 452 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 LSP1P33241 339 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PTGER2P43116 358 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 NUP107P57740 925 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CENPCQ03188 943 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 STX5Q13190 355 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 WLSQ5T9L3 541 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF746Q6NUN9 644 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 RIBC1Q8N443 379 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 C10orf53Q8N6V4 93 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ABTB1Q969K4 478 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 FAM162AQ96A26 154 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 EME1Q96AY2 570 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 RRN3Q9NYV6 651 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 USE1Q9NZ43 259 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 TRMT6Q9UJA5 497 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 RAD54BQ9Y620 910 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SF3B1O75533 1304 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SSU72P8A0A1W2PR75 194 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 SYNDIG1LA6NDD5 238 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 MYO1GB0I1T2 1018 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TM9SF1O15321 606 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TIMM44O43615 452 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 MTA2O94776 668 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CD2BP2O95400 341 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 FTLP02792 175 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CLTBP09497 229 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 LCP1P13796 627 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 MAPK8P45983 427 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 NCF4Q15080 339 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 CCDC142Q17RM4 750 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ADCK5Q3MIX3 580 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 OLFML2BQ68BL8 750 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 TIGD7Q6NT04 549 aaPredicted RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 ZCCHC8Q6NZY4 707 aaKnown RBP4.23□□□□□ -1.73
SCN3A-201ENST00000283254 LVRNQ6Q4G3 990 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 HERC6Q8IVU3 1022 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 STARD8Q92502 1023 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 DEPDC7Q96QD5 511 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 VPS28Q9UK41 221 aa4.23□□□□□ -1.73
SCN3A-201ENST00000283254 INTUQ9ULD6 942 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms