RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 RBM41Q96IZ5 413 aaKnown RBP13.15□□□□□ -0.3
BEST3-201ENST00000266661 RMDN2Q96LZ7 410 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 WRNIP1Q96S55 665 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 PCYT2Q99447 389 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 RXFP1Q9HBX9 757 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 UBN1Q9NPG3 1134 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 IVNS1ABPQ9Y6Y0 642 aa13.15□□□□□ -0.3
BEST3-201ENST00000266661 hCG_1818297A0A087WSY0 165 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 C3orf70A6NLC5 250 aaPredicted RBP13.14□□□□□ -0.31
BEST3-201ENST00000266661 PI4K2BG5E9Z4 385 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 PRPF4O43172 522 aaKnown RBP eCLIP13.14□□□□□ -0.31
BEST3-201ENST00000266661 LSM8O95777 96 aaKnown RBP13.14□□□□□ -0.31
BEST3-201ENST00000266661 ZSCAN5DPP0CG00 497 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 SLC8A1P32418 973 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 NF2P35240 595 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 POLGP54098 1239 aaPredicted RBP13.14□□□□□ -0.31
BEST3-201ENST00000266661 CCDC15Q0P6D6 951 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 RNASEH2BQ5TBB1 312 aaKnown RBP13.14□□□□□ -0.31
BEST3-201ENST00000266661 TXNRD3NBQ6F5E7 133 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 BRSK2Q8IWQ3 736 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 GDAP1Q8TB36 358 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 GRAMD1AQ96CP6 724 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 TGS1Q96RS0 853 aaKnown RBP13.14□□□□□ -0.31
BEST3-201ENST00000266661 CCDC77Q9BR77 488 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 MSTO1Q9BUK6 570 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 ECT2Q9H8V3 914 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 USTQ9Y2C2 406 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 FAM47DPA6NHR8 397 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 TTLL13PA6NNM8 815 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 F8VP50 259 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 CCNB1P14635 433 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 ETS1P14921 441 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 PECAM1P16284 738 aaPredicted RBP13.14□□□□□ -0.31
BEST3-201ENST00000266661 STX2P32856 288 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 CDKN2BP42772 138 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 VCPP55072 806 aaKnown RBP13.14□□□□□ -0.31
BEST3-201ENST00000266661 SP4Q02446 784 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 NR1H3Q13133 447 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 FASTKD3Q14CZ7 662 aaKnown RBP13.14□□□□□ -0.31
BEST3-201ENST00000266661 TAZQ16635 292 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 CYP4F22Q6NT55 531 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 CATSPERGQ6ZRH7 1159 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 PAXIP1Q6ZW49 1069 aaPredicted RBP13.14□□□□□ -0.31
BEST3-201ENST00000266661 TBC1D1Q86TI0 1168 aaPredicted RBP13.14□□□□□ -0.31
BEST3-201ENST00000266661 ECHDC2Q86YB7 292 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 ANKRD35Q8N283 1001 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 DEPTORQ8TB45 409 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 SLC35B2Q8TB61 432 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 CFAP57Q96MR6 1250 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 TTC25Q96NG3 672 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 ZIC5Q96T25 663 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 ACAD9Q9H845 621 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 ELP3Q9H9T3 547 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 ZNF302Q9NR11 478 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 TBK1Q9UHD2 729 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 GGT7Q9UJ14 662 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 PNMA3Q9UL41 463 aa13.14□□□□□ -0.31
BEST3-201ENST00000266661 GSTTP1A0A1W2PQM5 241 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 ABLIM1O14639 778 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 ADCY3O60266 1144 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 TJP3O95049 919 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 CALB1P05937 261 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 ITGAVP06756 1048 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 RDXP35241 583 aaKnown RBP13.13□□□□□ -0.31
BEST3-201ENST00000266661 MAP2K2P36507 400 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 SKIV2L2P42285 1042 aaKnown RBP13.13□□□□□ -0.31
BEST3-201ENST00000266661 AP3M2P53677 418 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 CAPSQ13938 189 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 VGLL4Q14135 290 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 MORF4L2Q15014 288 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 GNPTABQ3T906 1256 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 ZPBP2Q6X784 338 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.13□□□□□ -0.31
BEST3-201ENST00000266661 TEX13BQ9BXU2 312 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 ZNF518BQ9C0D4 1074 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 EBF2Q9HAK2 575 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 SAYSD1Q9NPB0 183 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 KLHL11Q9NVR0 708 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 NKIRAS1Q9NYS0 192 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 PCDHGC3Q9UN70 934 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
BEST3-201ENST00000266661 TLL2Q9Y6L7 1015 aa13.13□□□□□ -0.31
BEST3-201ENST00000266661 LRRIQ4A6NIV6 560 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 RASA4BC9J798 803 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 RASA4O43374 803 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 KRT1P04264 644 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 RFC5P40937 340 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 ALDH5A1P51649 535 aaPredicted RBP13.12□□□□□ -0.31
BEST3-201ENST00000266661 ARSEP51690 589 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 NEDD9Q14511 834 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 WDR49Q8IV35 697 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 ARFGAP1Q8N6T3 406 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 TCP11Q8WWU5 503 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 TFAP2BQ92481 460 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 PRCCQ92733 491 aaPredicted RBP13.12□□□□□ -0.31
BEST3-201ENST00000266661 MYCBPQ99417 103 aaPredicted RBP13.12□□□□□ -0.31
BEST3-201ENST00000266661 PHACTR1Q9C0D0 580 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 AS3MTQ9HBK9 375 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 PCDH9Q9HC56 1237 aa13.12□□□□□ -0.31
BEST3-201ENST00000266661 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms