RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 ESRRAP11474 423 aaPredicted RBP16.56■□□□□ 0.24
SHANK3-201ENST00000262795 PCYT1AP49585 367 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 PTPAQ15257 358 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 ZNF284Q2VY69 593 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 RSPH1Q8WYR4 309 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 KCNH7Q9NS40 1196 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 SPACA6W5XKT8 324 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 ABCA8O94911 1581 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 LIFRP42702 1097 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 ERFP50548 548 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 CCDC92Q53HC0 331 aaPredicted RBP16.56■□□□□ 0.24
SHANK3-201ENST00000262795 GRAMD4Q6IC98 578 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 TSC22D3Q99576 134 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 DMAP1Q9NPF5 467 aaPredicted RBP16.56■□□□□ 0.24
SHANK3-201ENST00000262795 NDRG2Q9UN36 371 aaKnown RBP16.56■□□□□ 0.24
SHANK3-201ENST00000262795 V9GYQ6 96 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 GYS1P13807 737 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 SLC28A3Q9HAS3 691 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 KIF24Q5T7B8 1368 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 USP11P51784 963 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 SH3BGRP55822 239 aaPredicted RBP16.56■□□□□ 0.24
SHANK3-201ENST00000262795 FSCN1Q16658 493 aaKnown RBP16.56■□□□□ 0.24
SHANK3-201ENST00000262795 NT5DC3Q86UY8 548 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 TCOF1Q13428 1488 aaKnown RBP16.56■□□□□ 0.24
SHANK3-201ENST00000262795 USP42Q9H9J4 1324 aaKnown RBP16.56■□□□□ 0.24
SHANK3-201ENST00000262795 A0A087WUV0 522 aaPredicted RBP16.56■□□□□ 0.24
SHANK3-201ENST00000262795 MYMKA6NI61 221 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 IL18RAPO95256 599 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 GTF2H1P32780 548 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 CAP2P40123 477 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 SNRNP35Q16560 246 aaKnown RBP16.56■□□□□ 0.24
SHANK3-201ENST00000262795 SGSM1Q2NKQ1 1148 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 HHIPL2Q6UWX4 724 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 ZNF711Q9Y462 761 aa16.56■□□□□ 0.24
SHANK3-201ENST00000262795 RIMS1Q86UR5 1692 aaKnown RBP16.55■□□□□ 0.24
SHANK3-201ENST00000262795 ZW10O43264 779 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 PRKAA1Q13131 559 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 HIST2H2ACQ16777 129 aaPredicted RBP16.55■□□□□ 0.24
SHANK3-201ENST00000262795 HIST2H2AA3Q6FI13 130 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 YY1AP1Q9H869 796 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 DCTN4Q9UJW0 460 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 CDHR2Q9BYE9 1310 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 RFC5P40937 340 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 MDM2Q00987 491 aaPredicted RBP16.55■□□□□ 0.24
SHANK3-201ENST00000262795 GRAMD1BQ3KR37 738 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 MARK2Q7KZI7 788 aaKnown RBP16.55■□□□□ 0.24
SHANK3-201ENST00000262795 LRRC37BQ96QE4 947 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 XPO6Q96QU8 1125 aaKnown RBP16.55■□□□□ 0.24
SHANK3-201ENST00000262795 SERPINI1Q99574 410 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 CGRRF1Q99675 332 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 ING2Q9H160 280 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 MROH8Q9H579 483 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 DDX56Q9NY93 547 aaKnown RBP16.55■□□□□ 0.24
SHANK3-201ENST00000262795 CHORDC1Q9UHD1 332 aaPredicted RBP16.55■□□□□ 0.24
SHANK3-201ENST00000262795 RHOCP08134 193 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 REEP2Q9BRK0 252 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 PRMT7Q9NVM4 692 aaPredicted RBP16.55■□□□□ 0.24
SHANK3-201ENST00000262795 ALKBH4Q9NXW9 302 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 APOBEC2Q9Y235 224 aaKnown RBP16.55■□□□□ 0.24
SHANK3-201ENST00000262795 RASA4BC9J798 803 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 RASA4O43374 803 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 RBBP8NLQ8NC74 664 aaPredicted RBP16.55■□□□□ 0.24
SHANK3-201ENST00000262795 ASAP2O43150 1006 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 EYA4O95677 639 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 GPC1P35052 558 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 SF3B3Q15393 1217 aaKnown RBP16.55■□□□□ 0.24
SHANK3-201ENST00000262795 C16orf87Q6PH81 154 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 FAM47EQ6ZV65 393 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 NEDD1Q8NHV4 660 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 UBE2OQ9C0C9 1292 aaKnown RBP16.55■□□□□ 0.24
SHANK3-201ENST00000262795 ECT2Q9H8V3 914 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 FHOD1Q9Y613 1164 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 TRPC1P48995 793 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 BARGINQ6ZT62 677 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 ISCA1Q9BUE6 129 aa16.55■□□□□ 0.24
SHANK3-201ENST00000262795 TLR8Q9NR97 1041 aaKnown RBP16.55■□□□□ 0.24
SHANK3-201ENST00000262795 TMEM88BA6NKF7 163 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 IL1R1P14778 569 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 ELNP15502 786 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 HERVK_113P62684 666 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 ANGPT1Q15389 498 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 ICE2Q659A1 982 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 ARL6IP4Q66PJ3 421 aaKnown RBP16.54■□□□□ 0.24
SHANK3-201ENST00000262795 CNPY4Q8N129 248 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 TTC39CQ8N584 583 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 IL1RL2Q9HB29 575 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 ZCCHC17Q9NP64 241 aaKnown RBP16.54■□□□□ 0.24
SHANK3-201ENST00000262795 TRIM16O95361 564 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 TCF3P15923 654 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 EPHB2P29323 1055 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 USP10Q14694 798 aaKnown RBP16.54■□□□□ 0.24
SHANK3-201ENST00000262795 DNAJC1Q96KC8 554 aaKnown RBP16.54■□□□□ 0.24
SHANK3-201ENST00000262795 BTBD6Q96KE9 485 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 EML4Q9HC35 981 aaKnown RBP16.54■□□□□ 0.24
SHANK3-201ENST00000262795 WWOXQ9NZC7 414 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 RNF17Q9BXT8 1623 aaKnown RBP16.54■□□□□ 0.24
SHANK3-201ENST00000262795 AP3M2P53677 418 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 ZNF280DQ6N043 979 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 COMMD2Q86X83 199 aa16.54■□□□□ 0.24
SHANK3-201ENST00000262795 GPRC5CQ9NQ84 441 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms