RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 EMBQ6PCB8 327 aa29.35■■■□□ 2.29
CCM2-201ENST00000258781 MAATS1Q7Z4T9 603 aa29.35■■■□□ 2.29
CCM2-201ENST00000258781 PHLDB2Q86SQ0 1253 aa29.35■■■□□ 2.29
CCM2-201ENST00000258781 EIF1ADQ8N9N8 165 aaKnown RBP29.35■■■□□ 2.29
CCM2-201ENST00000258781 FEZF2Q8TBJ5 459 aa29.35■■■□□ 2.29
CCM2-201ENST00000258781 PLVAPQ9BX97 442 aa29.35■■■□□ 2.29
CCM2-201ENST00000258781 MKI67P46013 3256 aaKnown RBP29.35■■■□□ 2.29
CCM2-201ENST00000258781 BHMG1C9JSJ3 638 aaPredicted RBP29.34■■■□□ 2.29
CCM2-201ENST00000258781 MAN1A1P33908 653 aa29.34■■■□□ 2.29
CCM2-201ENST00000258781 TNNT3P45378 269 aaPredicted RBP29.34■■■□□ 2.29
CCM2-201ENST00000258781 LBX1P52954 281 aa29.34■■■□□ 2.29
CCM2-201ENST00000258781 PTPN11Q06124 597 aaPredicted RBP29.34■■■□□ 2.29
CCM2-201ENST00000258781 PAK2Q13177 524 aa29.34■■■□□ 2.29
CCM2-201ENST00000258781 CTU1Q7Z7A3 348 aaKnown RBP29.34■■■□□ 2.29
CCM2-201ENST00000258781 WDTC1Q8N5D0 677 aa29.34■■■□□ 2.29
CCM2-201ENST00000258781 BEST2Q8NFU1 509 aa29.34■■■□□ 2.29
CCM2-201ENST00000258781 TMEM176AQ96HP8 235 aa29.34■■■□□ 2.29
CCM2-201ENST00000258781 HINFPQ9BQA5 517 aa29.34■■■□□ 2.29
CCM2-201ENST00000258781 ELOVL4Q9GZR5 314 aa29.34■■■□□ 2.29
CCM2-201ENST00000258781 ACBD3Q9H3P7 528 aa29.34■■■□□ 2.29
CCM2-201ENST00000258781 NXF3Q9H4D5 531 aaKnown RBP29.34■■■□□ 2.29
CCM2-201ENST00000258781 STARD7Q9NQZ5 370 aa29.34■■■□□ 2.29
CCM2-201ENST00000258781 PHF24Q9UPV7 400 aa29.34■■■□□ 2.29
CCM2-201ENST00000258781 PYGMP11217 842 aa29.34■■■□□ 2.29
CCM2-201ENST00000258781 GADD45GIP1Q8TAE8 222 aaPredicted RBP29.34■■■□□ 2.29
CCM2-201ENST00000258781 ZMAT2Q96NC0 199 aaKnown RBP29.34■■■□□ 2.29
CCM2-201ENST00000258781 BARX2Q9UMQ3 279 aaPredicted RBP29.34■■■□□ 2.29
CCM2-201ENST00000258781 TCRBV5S1A1TA0A578 114 aa29.33■■■□□ 2.29
CCM2-201ENST00000258781 KBTBD13C9JR72 458 aa29.33■■■□□ 2.29
CCM2-201ENST00000258781 RECQL4O94761 1208 aa29.33■■■□□ 2.29
CCM2-201ENST00000258781 MRPS6P82932 125 aaKnown RBP29.33■■■□□ 2.29
CCM2-201ENST00000258781 TAP1Q03518 808 aa29.33■■■□□ 2.29
CCM2-201ENST00000258781 DENND1BQ6P3S1 775 aa29.33■■■□□ 2.29
CCM2-201ENST00000258781 ERICH1Q86X53 443 aa29.33■■■□□ 2.29
CCM2-201ENST00000258781 LRRC52Q8N7C0 313 aa29.33■■■□□ 2.29
CCM2-201ENST00000258781 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP29.33■■■□□ 2.291e-6■■■■■ 58.1
CCM2-201ENST00000258781 CELF4Q9BZC1 486 aaKnown RBP29.33■■■□□ 2.29
CCM2-201ENST00000258781 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.33■■■□□ 2.297e-6■□□□□ 10.1
CCM2-201ENST00000258781 STRIP2Q9ULQ0 834 aa29.33■■■□□ 2.29
CCM2-201ENST00000258781 SBDSQ9Y3A5 250 aaKnown RBP eCLIP29.33■■■□□ 2.29
CCM2-201ENST00000258781 SCN1AP35498 2009 aa29.33■■■□□ 2.29
CCM2-201ENST00000258781 CTSHP09668 335 aa29.32■■■□□ 2.28
CCM2-201ENST00000258781 NNTQ13423 1086 aa29.32■■■□□ 2.28
CCM2-201ENST00000258781 UBXN11Q5T124 520 aa29.32■■■□□ 2.28
CCM2-201ENST00000258781 CAVIN3Q969G5 261 aa29.32■■■□□ 2.28
CCM2-201ENST00000258781 TWNKQ96RR1 684 aa29.32■■■□□ 2.28
CCM2-201ENST00000258781 IP6K2Q9UHH9 426 aa29.32■■■□□ 2.28
CCM2-201ENST00000258781 NR2E1Q9Y466 385 aa29.32■■■□□ 2.28
CCM2-201ENST00000258781 HES2Q9Y543 173 aa29.32■■■□□ 2.28
CCM2-201ENST00000258781 CDY2AQ9Y6F7 541 aa29.32■■■□□ 2.28
CCM2-201ENST00000258781 DNM1LO00429 736 aa29.31■■■□□ 2.28
CCM2-201ENST00000258781 TLR3O15455 904 aaKnown RBP29.31■■■□□ 2.28
CCM2-201ENST00000258781 VDRP11473 427 aa29.31■■■□□ 2.28
CCM2-201ENST00000258781 GPS2Q13227 327 aa29.31■■■□□ 2.28
CCM2-201ENST00000258781 SMC1AQ14683 1233 aaKnown RBP29.31■■■□□ 2.28
CCM2-201ENST00000258781 AADACL2Q6P093 401 aa29.31■■■□□ 2.28
CCM2-201ENST00000258781 DNAJC24Q6P3W2 148 aa29.31■■■□□ 2.28
CCM2-201ENST00000258781 SLC43A3Q8NBI5 491 aa29.31■■■□□ 2.28
CCM2-201ENST00000258781 CASKIN2Q8WXE0 1202 aa29.31■■■□□ 2.28
CCM2-201ENST00000258781 HMGXB4Q9UGU5 601 aa29.31■■■□□ 2.28
CCM2-201ENST00000258781 OGDHLQ9ULD0 1010 aa29.31■■■□□ 2.28
CCM2-201ENST00000258781 UBQLN1Q9UMX0 589 aaKnown RBP29.31■■■□□ 2.28
CCM2-201ENST00000258781 ZSCAN5CA6NGD5 496 aaPredicted RBP29.31■■■□□ 2.28
CCM2-201ENST00000258781 PSTPIP1O43586 416 aa29.31■■■□□ 2.28
CCM2-201ENST00000258781 SLC13A5Q86YT5 568 aaPredicted RBP29.31■■■□□ 2.28
CCM2-201ENST00000258781 CXCL16Q9H2A7 254 aa29.31■■■□□ 2.28
CCM2-201ENST00000258781 KIAA1257Q9ULG3 409 aa29.31■■■□□ 2.28
CCM2-201ENST00000258781 TMEM191CA6NGB0 347 aa29.3■■■□□ 2.28
CCM2-201ENST00000258781 CHRNA1P02708 482 aa29.3■■■□□ 2.28
CCM2-201ENST00000258781 CARSP49589 748 aaKnown RBP29.3■■■□□ 2.28
CCM2-201ENST00000258781 CUL1Q13616 776 aa29.3■■■□□ 2.28
CCM2-201ENST00000258781 XKR4Q5GH76 650 aa29.3■■■□□ 2.28
CCM2-201ENST00000258781 RPAINQ86UA6 219 aa29.3■■■□□ 2.28
CCM2-201ENST00000258781 AMACRQ9UHK6 382 aa29.3■■■□□ 2.28
CCM2-201ENST00000258781 M0QZ92 97 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 PHF2O75151 1096 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 HSPA1AP0DMV8 641 aaKnown RBP29.29■■■□□ 2.28
CCM2-201ENST00000258781 HSPA1BP0DMV9 641 aaKnown RBP29.29■■■□□ 2.28
CCM2-201ENST00000258781 MGAT3Q09327 533 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 FBXO46Q6PJ61 603 aaPredicted RBP29.29■■■□□ 2.28
CCM2-201ENST00000258781 RSPH3Q86UC2 560 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 C3orf20Q8ND61 904 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 ZNF333Q96JL9 665 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 ERVK-5Q9HDB9 667 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 TUBGCP4Q9UGJ1 667 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.29■■■□□ 2.28
CCM2-201ENST00000258781 TRPV2Q9Y5S1 764 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 ESYT3A0FGR9 886 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 RPLP2P05387 115 aaKnown RBP29.29■■■□□ 2.28
CCM2-201ENST00000258781 KCNE1P15382 129 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 CNGA2Q16280 664 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 PPP1R15BQ5SWA1 713 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 SND1Q7KZF4 910 aaKnown RBP eCLIP29.29■■■□□ 2.28
CCM2-201ENST00000258781 SENP6Q9GZR1 1112 aaPredicted RBP29.29■■■□□ 2.28
CCM2-201ENST00000258781 TRPV6Q9H1D0 765 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 MTUS1Q9ULD2 1270 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 HPCAL4Q9UM19 191 aa29.29■■■□□ 2.28
CCM2-201ENST00000258781 XPOTO43592 962 aaKnown RBP29.28■■■□□ 2.28
CCM2-201ENST00000258781 CD4P01730 458 aa29.28■■■□□ 2.28
CCM2-201ENST00000258781 CHRNA3P32297 505 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms