RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 NFKBIAP25963 317 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 RCAN1P53805 252 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 MAPK7Q13164 816 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 TAB1Q15750 504 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 RABL6Q3YEC7 729 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 TTC39BQ5VTQ0 682 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 BNIPLQ7Z465 357 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 GDPD5Q8WTR4 605 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 RAD54LQ92698 747 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 FAM162AQ96A26 154 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 SHCBP1LQ9BZQ2 653 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 COA1Q9GZY4 146 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 SEPT9Q9UHD8 586 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 CYP2D6P10635 497 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 CDC25CP30307 473 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 RPL5P46777 297 aaKnown RBP13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 FNTAP49354 379 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 ADSSL1Q8N142 457 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 RMDN1Q96DB5 314 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 PLEKHA8Q96JA3 519 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 PIGSQ96S52 555 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 CHID1Q9BWS9 393 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 VPS33BQ9H267 617 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 BTBD3Q9Y2F9 522 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 TRPC5OSA6NMA1 111 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 INO80B-WBP1J3KQ70 363 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 SASH3O75995 380 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 SPRP35270 261 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 PSMC6P62333 389 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 ANKRD40Q6AI12 368 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 TMEM270Q6UE05 265 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 LAYNQ6UX15 382 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 TBC1D10CQ8IV04 446 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 ARHGEF19Q8IW93 802 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 TCAIMQ8N3R3 496 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 MASTLQ96GX5 879 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 INO80BQ9C086 356 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 AS3MTQ9HBK9 375 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 PRG3Q9Y2Y8 225 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 DIP2AQ14689 1571 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 NRXN1Q9ULB1 1477 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 TULP2O00295 520 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 C21orf2O43822 256 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 ABCB1P08183 1280 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 PEX5P50542 639 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 RAD23AP54725 363 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 KCNK10P57789 538 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 ZNF667Q5HYK9 610 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 FAM160B1Q5W0V3 765 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 ATG9AQ7Z3C6 839 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 EPS8L3Q8TE67 593 aaKnown RBP13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 FNIP1Q8TF40 1166 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 SCFD1Q8WVM8 642 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 TADA1Q96BN2 335 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 SENP7Q9BQF6 1050 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 KANSL2Q9H9L4 492 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 PARVAQ9NVD7 372 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 HSPBP1Q9NZL4 362 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 HACD3Q9P035 362 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 ADGRB1O14514 1584 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 FAM95CA0A1B0GW59 222 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 RALBP11234 206 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 TCF3P15923 654 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 TBXAS1P24557 533 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 GCLCP48506 637 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 CACNB3P54284 484 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 PURAQ00577 322 aaKnown RBP13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 CHRNB3Q05901 458 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 MARCH10Q8NA82 808 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 ATXN7L3BQ96GX2 97 aa13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 SPRTNQ9H040 489 aaPredicted RBP13.71□□□□□ -0.21
PCDHGA3-201ENST00000253812 CNOT3O75175 753 aaKnown RBP13.71□□□□□ -0.22
PCDHGA3-201ENST00000253812 APRTP07741 180 aa13.71□□□□□ -0.22
PCDHGA3-201ENST00000253812 MYBL2P10244 700 aa13.71□□□□□ -0.22
PCDHGA3-201ENST00000253812 TBC1D10BQ4KMP7 808 aaPredicted RBP13.71□□□□□ -0.22
PCDHGA3-201ENST00000253812 CWF19L1Q69YN2 538 aaKnown RBP13.71□□□□□ -0.22
PCDHGA3-201ENST00000253812 OR6P1Q8NGX9 317 aa13.71□□□□□ -0.22
PCDHGA3-201ENST00000253812 ENKURQ8TC29 256 aa13.71□□□□□ -0.22
PCDHGA3-201ENST00000253812 OTULINQ96BN8 352 aa13.71□□□□□ -0.22
PCDHGA3-201ENST00000253812 FAM111AQ96PZ2 611 aa13.71□□□□□ -0.22
PCDHGA3-201ENST00000253812 FRMD8Q9BZ67 464 aaPredicted RBP13.71□□□□□ -0.22
PCDHGA3-201ENST00000253812 ILKAPQ9H0C8 392 aaPredicted RBP13.71□□□□□ -0.22
PCDHGA3-201ENST00000253812 CPDO75976 1380 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 CENPXA8MT69 81 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 TRIM13O60858 407 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 PIK3R1P27986 724 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 TALDO1P37837 337 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 CDK8P49336 464 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 NFIXQ14938 502 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 ZFP1Q6P2D0 407 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 KRT73Q86Y46 540 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 SH3RF3Q8TEJ3 882 aaPredicted RBP13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 DIS3LQ8TF46 1054 aaKnown RBP13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 ADAM30Q9UKF2 790 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 MAP2K7O14733 419 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 CLASP2O75122 1294 aaKnown RBP13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 RGS20O76081 388 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 ALOX12P18054 663 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 ATP6V1C1P21283 382 aa13.7□□□□□ -0.22
PCDHGA3-201ENST00000253812 JAK1P23458 1154 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms