RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 CLMNQ96JQ2 1002 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 KREMEN1Q96MU8 473 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 FAF1Q9UNN5 650 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 A8MUI8 341 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 ADRB2P07550 413 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 CNGA1P29973 690 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 SDC4P31431 198 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 PHKA2P46019 1235 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 NAIF1Q69YI7 327 aaPredicted RBP4.84□□□□□ -1.64
VPS13C-201ENST00000249837 TMEM237Q96Q45 408 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 TIPINQ9BVW5 301 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 KCND2Q9NZV8 630 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 AJAP1Q9UKB5 411 aaPredicted RBP4.84□□□□□ -1.64
VPS13C-201ENST00000249837 R3HDM2Q9Y2K5 976 aaKnown RBP4.84□□□□□ -1.64
VPS13C-201ENST00000249837 EVPLQ92817 2033 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 ZCCHC18P0CG32 403 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 TRIP10Q15642 601 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 MCUQ8NE86 351 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 ATXN2LQ8WWM7 1075 aaKnown RBP4.84□□□□□ -1.64
VPS13C-201ENST00000249837 HES6Q96HZ4 224 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 ZBTB45Q96K62 511 aaPredicted RBP4.84□□□□□ -1.64
VPS13C-201ENST00000249837 MYLK2Q9H1R3 596 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 BATF3Q9NR55 127 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 LRRC4BQ9NT99 713 aa4.84□□□□□ -1.64
VPS13C-201ENST00000249837 EXTL3O43909 919 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 DGAT1O75907 488 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 MTDHQ86UE4 582 aaKnown RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 PGM2Q96G03 612 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 BFARQ9NZS9 450 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 H3BRJ5 948 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 SLC4A1P02730 911 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 SERPINB4P48594 390 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 ANO5Q75V66 913 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 DPP9Q86TI2 863 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 PDZD8Q8NEN9 1154 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 NIF3L1Q9GZT8 377 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 KIAA1683Q9H0B3 1180 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 SUDS3Q9H7L9 328 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 SLCO1B3Q9NPD5 702 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 CISHQ9NSE2 258 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 CCDC22O60826 627 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 ICAM1P05362 532 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 EPHB2P29323 1055 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 RAP1GAPP47736 663 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 WDR75Q8IWA0 830 aaKnown RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 MEIS2O14770 477 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 DNAJC8O75937 253 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 RASA2Q15283 850 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 HSP90AA5PQ58FG0 334 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 IL31Q6EBC2 164 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 LRRC71Q8N4P6 559 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 RXFP2Q8WXD0 754 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 AIM2O14862 343 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 PIAS1O75925 651 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 PYGBP11216 843 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 CREB1P16220 341 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 DDR1Q08345 913 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 FAAP100Q0VG06 881 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 BMPR2Q13873 1038 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 PCDHB18PQ96TA0 734 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 TMEM120AQ9BXJ8 343 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 GHRP10912 638 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 CHRNB2P17787 502 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 SSTR1P30872 391 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 CASP2P42575 452 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 GEMIN4P57678 1058 aaKnown RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 ACTR2P61160 394 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 TAP1Q03518 808 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 C1QBPQ07021 282 aaKnown RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 SLC12A1Q13621 1099 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 DENND1BQ6P3S1 775 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 CDKL3Q8IVW4 592 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 EMC1Q8N766 993 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 LRRC57Q8N9N7 239 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 C3orf20Q8ND61 904 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 TEKT4Q8WW24 435 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 PGBD4Q96DM1 585 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 RXFP1Q9HBX9 757 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 ARMCX1Q9P291 453 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 MED1Q15648 1581 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 GARTP22102 1010 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 ELK3P41970 407 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 POU5F1BQ06416 359 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 TMED1Q13445 227 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 GOLGA7BQ2TAP0 167 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 KCNT1Q5JUK3 1230 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 RSBN1LQ6PCB5 846 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 MTBPQ96DY7 904 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 KCNMB3Q9NPA1 279 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 ABCD1P33897 745 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 MCOLN2Q8IZK6 566 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 FAM167AQ96KS9 214 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 CYP3A7-CYP3A51PA0A087WV96 503 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 DDX3YO15523 660 aaKnown RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 CYP3A7P24462 503 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 RFC1P35251 1148 aaPredicted RBP4.83□□□□□ -1.64
VPS13C-201ENST00000249837 CDH8P55286 799 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 TMEM62Q0P6H9 643 aa4.83□□□□□ -1.64
VPS13C-201ENST00000249837 LCA5Q86VQ0 697 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms