RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 NFX1Q12986 1120 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 EAPPQ56P03 285 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 FAM47EQ6ZV65 393 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 ANKRD35Q8N283 1001 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 WDTC1Q8N5D0 677 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 ARFGAP1Q8N6T3 406 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 ERP27Q96DN0 273 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 PTCD3Q96EY7 689 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 TRIM11Q96F44 468 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 RSRC1Q96IZ7 334 aaKnown RBP12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 TBC1D10AQ9BXI6 508 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 HAO1Q9UJM8 370 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 CORO1CQ9ULV4 474 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 MMP8P22894 467 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 HMGCS2P54868 508 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 NR1H3Q13133 447 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 TMEM130Q8N3G9 435 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 SLC35B2Q8TB61 432 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 NKD2Q969F2 451 aaPredicted RBP12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 PHACTR1Q9C0D0 580 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 C10orf88Q9H8K7 445 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 GABBR1Q9UBS5 961 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 USH1CQ9Y6N9 552 aa12.62□□□□□ -0.39
SEC61A1-201ENST00000243253 E7ENQ6 273 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 SKAP2O75563 359 aaPredicted RBP12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 DHRS4L1P0CG22 281 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 KRT10P13645 584 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 C1QBPQ07021 282 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 BAATQ14032 418 aaPredicted RBP12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 TMED2Q15363 201 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 ANO7Q6IWH7 933 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 STYK1Q6J9G0 422 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 ASAP3Q8TDY4 903 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 IFT74Q96LB3 600 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 EXOC7Q9UPT5 735 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 STK38LQ9Y2H1 464 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 C2CD2LO14523 706 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 ITGAVP06756 1048 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 CDKN2BP42772 138 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 NLRP11P59045 1033 aaKnown RBP12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 IL9RQ01113 521 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 MORF4L2Q15014 288 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 MFSD7Q6UXD7 560 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 JDP2Q8WYK2 163 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 ATG4CQ96DT6 458 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 C11orf70Q9BRQ4 267 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 TRABDQ9H4I3 376 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 PXMP2Q9NR77 195 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 LAMA3Q16787 3333 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 BRCA2P51587 3418 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 hCG_1818297A0A087WSY0 165 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 MAP3K13O43283 966 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 MAP3K6O95382 1288 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 PIGRP01833 764 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 CCNHP51946 323 aaPredicted RBP12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 HSF5Q4G112 596 aaPredicted RBP12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 LRRC38Q5VT99 294 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 ADGRD1Q6QNK2 874 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 STK32AQ8WU08 396 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 FNBP1Q96RU3 617 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 DENND2DQ9H6A0 471 aaPredicted RBP12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 TXLNGQ9NUQ3 528 aa12.61□□□□□ -0.39
SEC61A1-201ENST00000243253 WDR90Q96KV7 1748 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 F5H423 210 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 BANF1O75531 89 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 ATP5HO75947 161 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 ATG7O95352 703 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 KCNA2P16389 499 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 GBP2P32456 591 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 ETV4P43268 484 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 JAK3P52333 1124 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 IGBP1P78318 339 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 NIM1KQ8IY84 436 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 NIPA2Q8N8Q9 360 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 NAT8LQ8N9F0 302 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 SUPT20HQ8NEM7 779 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 CFAP61Q8NHU2 1237 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 ZNF75CPQ92670 426 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 PTPRN2Q92932 1015 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 PDCD2LQ9BRP1 358 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 ARHGEF4Q9NR80 690 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 CNTN3Q9P232 1028 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 ZNRF3Q9ULT6 936 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 SMG5Q9UPR3 1016 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 TNS1Q9HBL0 1735 aaKnown RBP12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 EXTL3O43909 919 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 HLA-DRAP01903 254 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 SFNP31947 248 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 DMP1Q13316 513 aaPredicted RBP12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 CUL2Q13617 745 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 EFTUD2Q15029 972 aaKnown RBP eCLIP12.6□□□□□ -0.393e-6■■■■□ 20.5
SEC61A1-201ENST00000243253 SLC45A4Q5BKX6 768 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 ZBTB41Q5SVQ8 909 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 FNBP1LQ5T0N5 605 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 AGGF1Q8N302 714 aaeCLIP12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 DCAKDQ8WVC6 231 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 IFT43Q96FT9 208 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 CFAP57Q96MR6 1250 aa12.6□□□□□ -0.39
SEC61A1-201ENST00000243253 KMT5AQ9NQR1 393 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms