RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 EDEM2Q9BV94 578 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 LSM14BQ9BX40 385 aaKnown RBP14.95□□□□□ -0.02
DDX39A-201ENST00000242776 TASP1Q9H6P5 420 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 FBRSL1Q9HCM7 1045 aaKnown RBP14.95□□□□□ -0.02
DDX39A-201ENST00000242776 CCL26Q9Y258 94 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 MYO16Q9Y6X6 1858 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 OBSL1O75147 1896 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 ABCA7Q8IZY2 2146 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 CEP295Q9C0D2 2601 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 OTOL1A6NHN0 477 aaPredicted RBP14.95□□□□□ -0.02
DDX39A-201ENST00000242776 C4orf47A7E2U8 309 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 LACTBL1A8MY62 500 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 CLDN3O15551 220 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 TOM1L1O75674 476 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 ARSAP15289 507 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 MUTP22033 750 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 NMT1P30419 496 aaKnown RBP14.95□□□□□ -0.02
DDX39A-201ENST00000242776 HOXA6P31267 233 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
DDX39A-201ENST00000242776 PLCB2Q00722 1185 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 PPP2R3AQ06190 1150 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 PSMD2Q13200 908 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 PLA2G2CQ5R387 149 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 UNQ6494/PRO21346Q6UXR6 183 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 ITIH5Q86UX2 942 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 SYNPOQ8N3V7 929 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 OR10T2Q8NGX3 314 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 SLC46A2Q9BY10 475 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 HPS4Q9NQG7 708 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 VPS45Q9NRW7 570 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 SCN1AP35498 2009 aa14.95□□□□□ -0.02
DDX39A-201ENST00000242776 FAM208BQ5VWN6 2430 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 NPHP3-ACAD11A0A0J9YXS1 232 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 ATF6P18850 670 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 GBP1P32455 592 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 TRAPPC10P48553 1259 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 ZNF252P-AS1Q0IIN9 211 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 RUNX3Q13761 415 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 VEPH1Q14D04 833 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 PLK5Q496M5 336 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 C1orf186Q6ZWK4 172 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 C4orf32Q8N8J7 132 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 MAB21L3Q8N8X9 362 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 CHFRQ96EP1 664 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 SENP8Q96LD8 212 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 DUSP15Q9H1R2 295 aaPredicted RBP14.94□□□□□ -0.02
DDX39A-201ENST00000242776 UBQLN1Q9UMX0 589 aaKnown RBP14.94□□□□□ -0.02
DDX39A-201ENST00000242776 ASB3Q9Y575 518 aa14.94□□□□□ -0.02
DDX39A-201ENST00000242776 TTC26A0AVF1 554 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 ATG13O75143 517 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 FGF19O95750 216 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 CLTAP09496 248 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 MAPTP10636 758 aaKnown RBP14.93□□□□□ -0.02
DDX39A-201ENST00000242776 ODC1P11926 461 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 LRPAP1P30533 357 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 PTPAQ15257 358 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 RILPL1Q5EBL4 403 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 TMEM196Q5HYL7 178 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 KRT79Q5XKE5 535 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 TMEM161BQ8NDZ6 487 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 RPLP0P6Q8NHW5 317 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 IL21Q9HBE4 155 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 OBP2AQ9NY56 170 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 MAGED2Q9UNF1 606 aaPredicted RBP14.93□□□□□ -0.02
DDX39A-201ENST00000242776 ZDHHC9Q9Y397 364 aa14.93□□□□□ -0.02
DDX39A-201ENST00000242776 CAVIN2O95810 425 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 CDC25CP30307 473 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 AARSP49588 968 aaKnown RBP eCLIP14.92□□□□□ -0.022e-6■■■■■ 30.9
DDX39A-201ENST00000242776 GALK1P51570 392 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 MCL1Q07820 350 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 BFSP1Q12934 665 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 MYBPC2Q14324 1141 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 ELF2Q15723 593 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 ZBTB6Q15916 424 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 SH3PXD2AQ5TCZ1 1133 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 JADE1Q6IE81 842 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 CMTM8Q8IZV2 173 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 RIN3Q8TB24 985 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 ZNF396Q96N95 335 aaPredicted RBP14.92□□□□□ -0.02
DDX39A-201ENST00000242776 OXCT2Q9BYC2 517 aaPredicted RBP14.92□□□□□ -0.02
DDX39A-201ENST00000242776 ABI2Q9NYB9 513 aaPredicted RBP14.92□□□□□ -0.02
DDX39A-201ENST00000242776 PCDHB6Q9Y5E3 794 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 PCDHGA5Q9Y5G8 931 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 KIAA1549LQ6ZVL6 1849 aa14.92□□□□□ -0.02
DDX39A-201ENST00000242776 PLS3P13797 630 aa14.91□□□□□ -0.02
DDX39A-201ENST00000242776 TYMPP19971 482 aa14.91□□□□□ -0.02
DDX39A-201ENST00000242776 AVPR1AP37288 418 aa14.91□□□□□ -0.02
DDX39A-201ENST00000242776 GPR15P49685 360 aa14.91□□□□□ -0.02
DDX39A-201ENST00000242776 LIG4P49917 911 aa14.91□□□□□ -0.02
DDX39A-201ENST00000242776 DGKEP52429 567 aa14.91□□□□□ -0.02
DDX39A-201ENST00000242776 SMTNP53814 917 aa14.91□□□□□ -0.02
DDX39A-201ENST00000242776 LILRA4P59901 499 aa14.91□□□□□ -0.02
DDX39A-201ENST00000242776 ORC2Q13416 577 aaPredicted RBP14.91□□□□□ -0.02
DDX39A-201ENST00000242776 ENOX2Q16206 610 aaKnown RBP14.91□□□□□ -0.02
DDX39A-201ENST00000242776 IL17AQ16552 155 aa14.91□□□□□ -0.02
DDX39A-201ENST00000242776 UAP1L1Q3KQV9 507 aa14.91□□□□□ -0.02
DDX39A-201ENST00000242776 SDHAF4Q5VUM1 108 aa14.91□□□□□ -0.02
DDX39A-201ENST00000242776 TXNDC8Q6A555 127 aa14.91□□□□□ -0.02
DDX39A-201ENST00000242776 ATL3Q6DD88 541 aa14.91□□□□□ -0.02
DDX39A-201ENST00000242776 KIAA1211LQ6NV74 962 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms