RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 DUSP11O75319 330 aaKnown RBP24.63■■□□□ 1.53
MSX2-201ENST00000239243 HMGCRP04035 888 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 MTMR3Q13615 1198 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 SGO2Q562F6 1265 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 IQCKQ8N0W5 287 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 EIF2AQ9BY44 585 aaKnown RBP24.63■■□□□ 1.53
MSX2-201ENST00000239243 USTQ9Y2C2 406 aa24.63■■□□□ 1.53
MSX2-201ENST00000239243 TCRBV7S2A1N4TA0A589 114 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 SSR1P43307 286 aaKnown RBP24.62■■□□□ 1.53
MSX2-201ENST00000239243 PURAQ00577 322 aaKnown RBP24.62■■□□□ 1.53
MSX2-201ENST00000239243 HIC1Q14526 733 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 CNGA2Q16280 664 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 CCDC50Q8IVM0 306 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 NIPA2Q8N8Q9 360 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 SLCO2A1Q92959 643 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 ZIM3Q96PE6 472 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 CNTN3Q9P232 1028 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.62■■□□□ 1.53
MSX2-201ENST00000239243 HOXC8P31273 242 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 CRYBB1P53674 252 aaPredicted RBP24.62■■□□□ 1.53
MSX2-201ENST00000239243 IRX5P78411 483 aaPredicted RBP24.62■■□□□ 1.53
MSX2-201ENST00000239243 STILQ15468 1287 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 PTPN20Q4JDL3 420 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 TTC27Q6P3X3 843 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 LRRC52Q8N7C0 313 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 TWNKQ96RR1 684 aa24.62■■□□□ 1.53
MSX2-201ENST00000239243 PIN4Q9Y237 131 aaKnown RBP24.62■■□□□ 1.53
MSX2-201ENST00000239243 CA12O43570 354 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 TM4SF4P48230 202 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 TAS2R40P59535 323 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 ZBTB6Q15916 424 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 RBM41Q96IZ5 413 aaKnown RBP24.61■■□□□ 1.53
MSX2-201ENST00000239243 HEXIM2Q96MH2 286 aaKnown RBP24.61■■□□□ 1.53
MSX2-201ENST00000239243 FMO2Q99518 471 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 NT5C1AQ9BXI3 368 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 FAM129AQ9BZQ8 928 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 TRIM31Q9BZY9 425 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 NEUROG2Q9H2A3 272 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 SYNCQ9H7C4 482 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 FEZ2Q9UHY8 353 aaPredicted RBP24.61■■□□□ 1.53
MSX2-201ENST00000239243 ECEL1O95672 775 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 ATF7P17544 494 aaPredicted RBP24.61■■□□□ 1.53
MSX2-201ENST00000239243 TAF2Q6P1X5 1199 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 RIN2Q8WYP3 895 aaPredicted RBP24.61■■□□□ 1.53
MSX2-201ENST00000239243 PSD3Q9NYI0 1048 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 HMGXB4Q9UGU5 601 aa24.61■■□□□ 1.53
MSX2-201ENST00000239243 UBQLN1Q9UMX0 589 aaKnown RBP24.61■■□□□ 1.53
MSX2-201ENST00000239243 SIGLEC16A6NMB1 481 aa24.6■■□□□ 1.53
MSX2-201ENST00000239243 XPOTO43592 962 aaKnown RBP24.6■■□□□ 1.53
MSX2-201ENST00000239243 MICAL2O94851 1124 aa24.6■■□□□ 1.53
MSX2-201ENST00000239243 GJB6O95452 261 aa24.6■■□□□ 1.53
MSX2-201ENST00000239243 NDST1P52848 882 aa24.6■■□□□ 1.53
MSX2-201ENST00000239243 FCGRTP55899 365 aa24.6■■□□□ 1.53
MSX2-201ENST00000239243 CYP4A22Q5TCH4 519 aa24.6■■□□□ 1.53
MSX2-201ENST00000239243 ALKAL1Q6UXT8 129 aa24.6■■□□□ 1.53
MSX2-201ENST00000239243 FNIP1Q8TF40 1166 aa24.6■■□□□ 1.53
MSX2-201ENST00000239243 PPP1R13LQ8WUF5 828 aa24.6■■□□□ 1.53
MSX2-201ENST00000239243 ZBTB9Q96C00 473 aa24.6■■□□□ 1.53
MSX2-201ENST00000239243 MIS12Q9H081 205 aa24.6■■□□□ 1.53
MSX2-201ENST00000239243 O00370 1275 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 RECQL4O94761 1208 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 ZNF268Q14587 947 aaPredicted RBP24.59■■□□□ 1.53
MSX2-201ENST00000239243 SPDYCQ5MJ68 293 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 MFSD14CQ5VZR4 134 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 SYDE1Q6ZW31 735 aaPredicted RBP24.59■■□□□ 1.53
MSX2-201ENST00000239243 RCOR2Q8IZ40 523 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 TMEM130Q8N3G9 435 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 GRK7Q8WTQ7 553 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 FAM204AQ9H8W3 233 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 M0QYV0 167 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 KRT3P12035 628 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 PSMC1P62191 440 aaKnown RBP24.59■■□□□ 1.53
MSX2-201ENST00000239243 DMTNQ08495 405 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 LRIG3Q6UXM1 1119 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 PKNOX2Q96KN3 472 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 ZMAT2Q96NC0 199 aaKnown RBP24.59■■□□□ 1.53
MSX2-201ENST00000239243 OSBPL8Q9BZF1 889 aa24.59■■□□□ 1.53
MSX2-201ENST00000239243 NXF3Q9H4D5 531 aaKnown RBP24.59■■□□□ 1.53
MSX2-201ENST00000239243 CD4P01730 458 aa24.58■■□□□ 1.53
MSX2-201ENST00000239243 C6orf222P0C671 652 aaPredicted RBP24.58■■□□□ 1.53
MSX2-201ENST00000239243 ZNF252P-AS1Q0IIN9 211 aa24.58■■□□□ 1.53
MSX2-201ENST00000239243 ORC1Q13415 861 aa24.58■■□□□ 1.53
MSX2-201ENST00000239243 DAB2IPQ5VWQ8 1189 aa24.58■■□□□ 1.53
MSX2-201ENST00000239243 TMEM40Q8WWA1 233 aa24.58■■□□□ 1.53
MSX2-201ENST00000239243 MTG1Q9BT17 334 aaPredicted RBP24.58■■□□□ 1.53
MSX2-201ENST00000239243 DDX56Q9NY93 547 aaKnown RBP24.58■■□□□ 1.53
MSX2-201ENST00000239243 CYTH4Q9UIA0 394 aa24.58■■□□□ 1.53
MSX2-201ENST00000239243 RALAP11233 206 aa24.58■■□□□ 1.52
MSX2-201ENST00000239243 GABRB2P47870 512 aa24.58■■□□□ 1.52
MSX2-201ENST00000239243 GYS2P54840 703 aa24.58■■□□□ 1.52
MSX2-201ENST00000239243 GJA9P57773 515 aa24.58■■□□□ 1.52
MSX2-201ENST00000239243 COPS2P61201 443 aa24.58■■□□□ 1.52
MSX2-201ENST00000239243 ZNF200P98182 395 aaPredicted RBP24.58■■□□□ 1.52
MSX2-201ENST00000239243 KLF1Q13351 362 aaPredicted RBP24.58■■□□□ 1.52
MSX2-201ENST00000239243 ODF2Q5BJF6 829 aa24.58■■□□□ 1.52
MSX2-201ENST00000239243 TMC3Q7Z5M5 1100 aa24.58■■□□□ 1.52
MSX2-201ENST00000239243 IPO4Q8TEX9 1081 aaKnown RBP24.58■■□□□ 1.52
MSX2-201ENST00000239243 SPC25Q9HBM1 224 aa24.58■■□□□ 1.52
MSX2-201ENST00000239243 ZDHHC18Q9NUE0 388 aa24.58■■□□□ 1.52
MSX2-201ENST00000239243 HES2Q9Y543 173 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms