RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 HEY1Q9Y5J3 304 aa9.91□□□□□ -0.82
CCDC113-201ENST00000219299 USP27XA6NNY8 438 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 DPYSL4O14531 572 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 FAM200BP0CF97 657 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 ZNF467Q7Z7K2 595 aaPredicted RBP9.9□□□□□ -0.82
CCDC113-201ENST00000219299 LPPQ93052 612 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 ZCCHC17Q9NP64 241 aaKnown RBP9.9□□□□□ -0.82
CCDC113-201ENST00000219299 KANSL3Q9P2N6 904 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 DAAM1Q9Y4D1 1078 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 DHX15O43143 795 aaKnown RBP9.9□□□□□ -0.82
CCDC113-201ENST00000219299 SRGAP2O75044 1071 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 ATF2P15336 505 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 RTP1P59025 263 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 ZNF792Q3KQV3 632 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 HOMEZQ8IX15 550 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 BSNDQ8WZ55 320 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 CYFIP2Q96F07 1278 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 ACO2Q99798 780 aaKnown RBP9.9□□□□□ -0.82
CCDC113-201ENST00000219299 NIFKQ9BYG3 293 aaKnown RBP9.9□□□□□ -0.82
CCDC113-201ENST00000219299 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC113-201ENST00000219299 DHX35Q9H5Z1 703 aaKnown RBP9.9□□□□□ -0.82
CCDC113-201ENST00000219299 A0A087X0T9 212 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 SMIM35A0A1B0GVV1 85 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 GIPC1O14908 333 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 ATMINO43313 823 aaPredicted RBP9.9□□□□□ -0.82
CCDC113-201ENST00000219299 MAP3K7O43318 606 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 FAM228BP0C875 321 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 MAN1A1P33908 653 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 SERPINB6P35237 376 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 TNFSF9P41273 254 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 DLG4P78352 724 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 PPP3CAQ08209 521 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 DARS2Q6PI48 645 aaKnown RBP9.9□□□□□ -0.82
CCDC113-201ENST00000219299 C4orf50Q6ZRC1 276 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 CTAGE3PQ8IX95 158 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 ADGRF2Q8IZF7 708 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 BBS5Q8N3I7 341 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 C1orf131Q8NDD1 294 aaKnown RBP9.9□□□□□ -0.82
CCDC113-201ENST00000219299 NCAPGQ9BPX3 1015 aa9.9□□□□□ -0.82
CCDC113-201ENST00000219299 MROH7Q68CQ1 1323 aa9.9□□□□□ -0.83
CCDC113-201ENST00000219299 CASZ1Q86V15 1759 aa9.9□□□□□ -0.83
CCDC113-201ENST00000219299 TGFB1I1O43294 461 aa9.9□□□□□ -0.83
CCDC113-201ENST00000219299 NCK2O43639 380 aa9.9□□□□□ -0.83
CCDC113-201ENST00000219299 SGPL1O95470 568 aa9.9□□□□□ -0.83
CCDC113-201ENST00000219299 SNAI1O95863 264 aaPredicted RBP9.9□□□□□ -0.83
CCDC113-201ENST00000219299 ACAT1P24752 427 aaKnown RBP9.9□□□□□ -0.83
CCDC113-201ENST00000219299 CDK17Q00537 523 aa9.9□□□□□ -0.83
CCDC113-201ENST00000219299 GOLGA7BQ2TAP0 167 aa9.9□□□□□ -0.83
CCDC113-201ENST00000219299 CTXN3Q4LDR2 81 aa9.9□□□□□ -0.83
CCDC113-201ENST00000219299 CBWD6Q4V339 395 aa9.9□□□□□ -0.83
CCDC113-201ENST00000219299 CBWD3Q5JTY5 395 aa9.9□□□□□ -0.83
CCDC113-201ENST00000219299 CBWD5Q5RIA9 395 aa9.9□□□□□ -0.83
CCDC113-201ENST00000219299 PBKQ96KB5 322 aa9.9□□□□□ -0.83
CCDC113-201ENST00000219299 XPNPEP1Q9NQW7 623 aa9.9□□□□□ -0.83
CCDC113-201ENST00000219299 WRAP73Q9P2S5 460 aaPredicted RBP9.9□□□□□ -0.83
CCDC113-201ENST00000219299 ASTN1O14525 1302 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 MIF4GDA9UHW6 222 aaKnown RBP9.89□□□□□ -0.83
CCDC113-201ENST00000219299 DARSP14868 501 aaKnown RBP9.89□□□□□ -0.83
CCDC113-201ENST00000219299 ACLYP53396 1101 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 MRPS25P82663 173 aaKnown RBP9.89□□□□□ -0.83
CCDC113-201ENST00000219299 SNX17Q15036 470 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 LRRC31Q6UY01 552 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 PDCD7Q8N8D1 485 aaKnown RBP9.89□□□□□ -0.83
CCDC113-201ENST00000219299 KIF9Q9HAQ2 790 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 UBN1Q9NPG3 1134 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 IP6K2Q9UHH9 426 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 PTCH2Q9Y6C5 1203 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 SCN7AQ01118 1682 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 ANKRD36CQ5JPF3 1778 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 LRRIQ3A6PVS8 624 aaPredicted RBP9.89□□□□□ -0.83
CCDC113-201ENST00000219299 AP1G2O75843 785 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 HMBSP08397 361 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 TRIP13Q15645 432 aaPredicted RBP9.89□□□□□ -0.83
CCDC113-201ENST00000219299 GLE1Q53GS7 698 aaKnown RBP9.89□□□□□ -0.83
CCDC113-201ENST00000219299 SRLQ86TD4 932 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 PTPN18Q99952 460 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 TRPC7Q9HCX4 862 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 ANGPTL2Q9UKU9 493 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 NOVA2Q9UNW9 492 aaKnown RBP9.89□□□□□ -0.83
CCDC113-201ENST00000219299 GOLGA8CPA6NN73 597 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 ANKRD65E5RJM6 399 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 DNAJC8O75937 253 aaPredicted RBP9.89□□□□□ -0.83
CCDC113-201ENST00000219299 LMNAP02545 664 aaKnown RBP9.89□□□□□ -0.83
CCDC113-201ENST00000219299 DHX9Q08211 1270 aaKnown RBP9.89□□□□□ -0.83
CCDC113-201ENST00000219299 MS4A4AQ96JQ5 239 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 TRMT13Q9NUP7 481 aaKnown RBP9.89□□□□□ -0.83
CCDC113-201ENST00000219299 NAGPAQ9UK23 515 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 TFR2Q9UP52 801 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 BRWD3Q6RI45 1802 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 COL2A1P02458 1487 aaPredicted RBP9.89□□□□□ -0.83
CCDC113-201ENST00000219299 A0A1W2PQJ5 194 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 ADRB2P07550 413 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 MYBL1P10243 752 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 RALAP11233 206 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 FAM171A1Q5VUB5 890 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 OVOS1Q6IE37 1185 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 LRRC55Q6ZSA7 311 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 MCEEQ96PE7 176 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 CENPKQ9BS16 269 aa9.89□□□□□ -0.83
CCDC113-201ENST00000219299 WDR35Q9P2L0 1181 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms