RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Ccdc163A2AGD7 326 aa19.08■□□□□ 0.64
Trim71-201ENSMUST00000111816 Prkaa1Q5EG47 559 aa19.08■□□□□ 0.64
Trim71-201ENSMUST00000111816 Klhl23Q6GQU2 558 aa19.08■□□□□ 0.64
Trim71-201ENSMUST00000111816 Snx9Q91VH2 595 aa19.08■□□□□ 0.64
Trim71-201ENSMUST00000111816 Rnf19bA2A7Q9 732 aa19.08■□□□□ 0.64
Trim71-201ENSMUST00000111816 Rhox3fA2ANE1 215 aa19.08■□□□□ 0.64
Trim71-201ENSMUST00000111816 Gfpt1P47856 697 aa19.08■□□□□ 0.64
Trim71-201ENSMUST00000111816 Eif3eP60229 445 aaKnown RBP19.08■□□□□ 0.64
Trim71-201ENSMUST00000111816 Atf4Q06507 349 aa19.08■□□□□ 0.64
Trim71-201ENSMUST00000111816 Fam102aQ78T81 392 aa19.08■□□□□ 0.64
Trim71-201ENSMUST00000111816 Cyfip1Q7TMB8 1253 aa19.08■□□□□ 0.64
Trim71-201ENSMUST00000111816 Tnfaip8Q921Z5 198 aa19.08■□□□□ 0.64
Trim71-201ENSMUST00000111816 Sult6b2B7ZWN4 290 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 S100zB9EJL3 99 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 ErmardE9Q048 622 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Pex5O09012 639 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 RalaP63321 206 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Fads2p1Q0VAX3 487 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Calhm6Q8C9E8 313 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Pou4f1P17208 421 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Rpl5P47962 297 aaKnown RBP19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 CidecP56198 239 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 CstaP56567 97 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Klra8Q60682 266 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Ireb2Q811J3 963 aaKnown RBP19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Prdm8Q8BZ97 687 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Elovl6Q920L5 267 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Pabpc1lA2A5N3 607 aaKnown RBP19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Rap1gapA2ALS5 663 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Cd40lgP27548 260 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 IppP28575 584 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Lrrc41Q8K1C9 807 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Znf426Q8R1D1 550 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Tm9sf1Q9DBU0 606 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 RhouQ9EQT3 261 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Tlx1P43345 332 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Rpl19P84099 196 aaKnown RBP19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Col6a1Q04857 1025 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Ndufaf2Q59J78 168 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Cyp2c37P56654 490 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Cfap206Q6PE87 622 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Abcc12Q80WJ6 1366 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Osbpl8B9EJ86 889 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Gm12794L7MTS5 483 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Anxa8O35640 327 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Psmd5Q8BJY1 504 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Naf1Q3UMQ8 489 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 LdhdQ7TNG8 484 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Wnk4Q80UE6 1222 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Snx17Q8BVL3 470 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 EurlQ9D7G4 290 aa19.07■□□□□ 0.64
Trim71-201ENSMUST00000111816 Gm8011K7N6Y5 207 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Pid1Q3UBG2 217 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Mup20Q5FW60 181 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Nr1d2Q60674 576 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Tspyl4Q8VD63 406 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Gm3182K7N6T8 263 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 HadhQ61425 314 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Eif2b4Q61749 524 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Camkk2Q8C078 588 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Sh3glb2Q8R3V5 400 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Slc12a8Q8VI23 705 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Phf2Q9WTU0 1096 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Gm3424L7N298 263 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Gm8246M0QWX9 263 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 EXOC1LB9EK06 172 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Hoxb8P09632 243 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Hist2h2acQ64523 129 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Hist2h2aa1Q6GSS7 130 aaKnown RBP19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Ing4Q8C0D7 249 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Pcdha11Q91Y19 950 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Thg1lQ9CY52 298 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 BhmtO35490 407 aaKnown RBP19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 DnttP09838 530 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Fbxo38Q8BMI0 1194 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Ckap4Q8BMK4 575 aaKnown RBP19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 CygbQ9CX80 190 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Dnaja4Q9JMC3 397 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Atp10dQ8K2X1 1416 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Arf5P84084 180 aaKnown RBP19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Usp13Q5BKP2 858 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Itga7Q61738 1179 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Usp7Q6A4J8 1103 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Stk25Q9Z2W1 426 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Dbndd1Q9CZ00 160 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Olfr711Q9EPG2 314 aa19.06■□□□□ 0.64
Trim71-201ENSMUST00000111816 Dhx35A2ACQ1 703 aaKnown RBP19.05■□□□□ 0.64
Trim71-201ENSMUST00000111816 Gm5072A2AHM1 344 aa19.05■□□□□ 0.64
Trim71-201ENSMUST00000111816 Csnk2bP67871 215 aaKnown RBP19.05■□□□□ 0.64
Trim71-201ENSMUST00000111816 Terb1Q8C0V1 768 aa19.05■□□□□ 0.64
Trim71-201ENSMUST00000111816 Micu3Q9CTY5 523 aa19.05■□□□□ 0.64
Trim71-201ENSMUST00000111816 Actl7aQ9QY84 440 aa19.05■□□□□ 0.64
Trim71-201ENSMUST00000111816 Nme3Q9WV85 169 aa19.05■□□□□ 0.64
Trim71-201ENSMUST00000111816 Myom2Q14BI5 1463 aa19.05■□□□□ 0.64
Trim71-201ENSMUST00000111816 Kctd14A0A0U1RNG7 287 aa19.05■□□□□ 0.64
Trim71-201ENSMUST00000111816 Ptch2O35595 1182 aa19.05■□□□□ 0.64
Trim71-201ENSMUST00000111816 Aff1O88573 1216 aa19.05■□□□□ 0.64
Trim71-201ENSMUST00000111816 Atp5bP56480 529 aaKnown RBP19.05■□□□□ 0.64
Trim71-201ENSMUST00000111816 Tlr8P58682 1032 aa19.05■□□□□ 0.64
Trim71-201ENSMUST00000111816 TiprlQ8BH58 271 aa19.05■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms