RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Sox8Q04886 464 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Pi4k2aQ2TBE6 479 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Znhit6Q3UFB2 460 aaKnown RBP22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Ttc9Q3V038 219 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Vav2Q60992 868 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Gm14819Q62478 212 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Wdtc1Q80ZK9 677 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Rnaseh2bQ80ZV0 308 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Brat1Q8C3R1 822 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Ctage5Q8R311 779 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Gpr37l1Q99JG2 481 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Dph5Q9CWQ0 281 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Mms19Q9D071 1031 aa22.45■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Top6blJ3QMY9 579 aa22.44■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Smpd1Q04519 627 aa22.44■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Cd163Q2VLH6 1121 aa22.44■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Xkr5Q5GH66 676 aa22.44■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Zfp120Q8BZW4 436 aa22.44■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Tmem132cQ8CEF9 1099 aa22.44■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 CmasQ99KK2 432 aaKnown RBP22.44■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Bbs5Q9CZQ9 341 aa22.44■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Grk1Q9WVL4 564 aa22.44■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Casp8ap2Q9WUF3 1962 aa22.44■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 1700031M16RikA0A087WSH0 82 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Birc5O70201 140 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Lamp2P17047 415 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 SftpdP50404 374 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Fermt1P59113 677 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Sparcl1P70663 650 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Bbof1Q3V079 533 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Odr4Q4PJX1 447 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Mxd4Q60948 209 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 CochQ62507 552 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Cd300lfQ6SJQ7 337 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Cyth4Q80YW0 393 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Zswim4Q8C7B8 1101 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Gm5591Q8CDK1 855 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Olfr532Q8VGT4 309 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Ddx56Q9D0R4 546 aaKnown RBP22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Vps33aQ9D2N9 598 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 BC025446A0A087WQT1 134 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Apol11aE9PZG0 334 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 P01650 108 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 P01653 108 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Slc1a1P51906 523 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Fam193bQ3U2K0 892 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Ctc1Q5SUQ9 1212 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Q66JV7 365 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Tmem145Q8C4U2 746 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Tph2Q8CGV2 488 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Kctd15Q8K0E1 283 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Tbx22Q8K402 517 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Rem2Q8VEL9 341 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Sdcbp2Q99JZ0 292 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Stx17Q9D0I4 301 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Cul2Q9D4H8 745 aa22.43■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 0610012G03RikA0A0J9YTR2 95 aa22.42■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Col6a1Q04857 1025 aa22.42■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 EsrrbQ61539 433 aa22.42■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Ssxb10Q6XAR7 170 aa22.42■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 PisdQ8BSF4 406 aa22.42■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Dis3lQ8C0S1 1053 aa22.42■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Ccdc28aQ8CEI3 192 aa22.42■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Fuca1Q99LJ1 452 aa22.42■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Mkrn2Q9ERV1 416 aaKnown RBP22.42■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Cyp39a1Q9JKJ9 470 aa22.42■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Iigp1Q9QZ85 413 aa22.42■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Zfp236S4R299 1847 aa22.42■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Cyp4a29A0A087WPC3 509 aa22.41■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Pex10B1AUE5 324 aa22.41■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Trip13Q3UA06 432 aa22.41■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Rhbdf2Q80WQ6 827 aa22.41■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Cct8l1Q80YT3 562 aa22.41■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Gpc5Q8CAL5 572 aa22.41■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Cyp2d26Q8CIM7 500 aa22.41■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Etv3Q8R4Z4 513 aa22.41■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Plekhh3Q8VCE9 796 aa22.41■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Gm6657A0A1B0GRJ3 277 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 ZxdbA2CE44 873 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Gm281D3Z1Y0 860 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Gm6583E9Q8Z1 469 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Gm3415J3QMS8 315 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Smarcad1Q04692 1021 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 LbrQ3U9G9 626 aaKnown RBP22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Q3UE31 404 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Tfap2bQ61313 459 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Papd5Q68ED3 633 aaKnown RBP22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 SpopQ6ZWS8 374 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Arhgap15Q811M1 481 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Gm3404Q9D506 307 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Rdh14Q9ERI6 334 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Cacng4Q9JJV4 327 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Grik3B1AS29 919 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Ephb4P54761 987 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 NcanP55066 1268 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Adcy2Q80TL1 1090 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Lig4Q8BTF7 911 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Slc9a4Q8BUE1 797 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Q8CD60 292 aa22.4■■□□□ 1.18
Ccdc88a-202ENSMUST00000109477 Inpp5fQ8CDA1 1132 aa22.4■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms