RNA–Protein interactions for RNA: ENSMUST00000094646.5

Vps4b-201, Transcript of Vacuolar protein sorting-associated protein 4B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4b, Length 4,633 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4b-201ENSMUST00000094646 Scyl3Q9DBQ7 735 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Inpp4aQ9EPW0 939 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Ppargc1aO70343 797 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Dync1i2O88487 612 aaKnown RBP13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Wee1P47810 646 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Fam198bQ3UPI1 517 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Fam198aQ3UY90 562 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Apol7eQ3UZ24 369 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Fam214aQ69ZK7 1075 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Tmcc1Q69ZZ6 649 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Oas1dQ8VI95 361 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Ndufaf7Q9CWG8 436 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Aff4Q9ESC8 1160 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 PtsQ9R1Z7 144 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Slfn2Q9Z0I6 378 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Sept5Q9Z2Q6 369 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Gcnt4E9Q649 455 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Olfr8Q60892 310 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 FAM120AQ6A0A9 1112 aaKnown RBP13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Atg9bQ6EBV9 922 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 WhrnQ80VW5 918 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Habp4Q9JKS5 411 aaKnown RBP13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Trpc7Q9WVC5 862 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 4931408C20RikE9PWP9 1381 aa13.45□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Wdr72D3YYM4 1114 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Cdc25cP48967 447 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Q6GQU0 248 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Mindy1Q76LS9 468 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Dclre1bQ8C7W7 541 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Kct2Q8K201 259 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Gtse1Q8R080 741 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Sv2aQ9JIS5 742 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 PodxlQ9R0M4 503 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 1700017N19RikA0A087WPJ1 469 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Oip5A2AQ14 241 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Sec22bO08547 215 aaKnown RBP13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 PtpreP49446 699 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Ptprn2P80560 1001 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Sdr16c6Q05A13 316 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Sh3gl3Q62421 347 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Ssxb5Q6XAS2 159 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Washc5Q8C2E7 1159 aaKnown RBP13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Trip10Q8CJ53 603 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Borcs6Q9D6W8 360 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 PnkpQ9JLV6 522 aaKnown RBP13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 4930407I10RikD3Z5T8 1512 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 WapP01173 134 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 OsbpQ3B7Z2 805 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Ccdc40Q8BI79 1192 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Nlrp4aQ8BU40 982 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Ttc4Q8R3H9 386 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Fbxo16Q9QZM9 334 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Usp32F8VPZ3 1604 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Pdzrn4E9PUZ9 1014 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Gm3095E9Q058 166 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 StrnO55106 780 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 ChrngP04760 519 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Cd19P25918 547 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 B3gat3P58158 335 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Patl1Q3TC46 770 aaKnown RBP13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Lgr6Q3UVD5 967 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Gm11437Q5QR91 290 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Rbbp7Q60973 425 aaKnown RBP13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 FktnQ8R507 461 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Eif3hQ91WK2 352 aaKnown RBP13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Ubxn11Q9D572 484 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 LrmdaQ9D9B4 229 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 PlekQ9JHK5 350 aaKnown RBP13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 MkksQ9JI70 570 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 SufuQ9Z0P7 484 aa13.44□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Gm29554A0A087WNW4 188 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 LmnaP48678 665 aaKnown RBP13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Papd7Q6PB75 542 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Sarm1Q6PDS3 724 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Elmo2Q8BHL5 732 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Mical2Q8BML1 960 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Kirrel3Q8BR86 778 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Ppp1r11Q8K1L5 131 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Lgi2Q8K4Z0 550 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Znf654Q9DAU9 571 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Stk4Q9JI11 487 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Rhox3cA2AWM0 215 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 A530032D15RikE9Q422 215 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Foxn2E9Q7L6 429 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Rhox3hL7MU37 215 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 CrymO54983 313 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 ProcP33587 460 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Sash1P59808 1230 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Serpina5P70458 405 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 CiitaP79621 1155 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Rhox3aQ4TU90 215 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Tp53i13Q5F267 385 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Chsy1Q6ZQ11 800 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 MtrrQ8C1A3 696 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Cdk17Q8K0D0 523 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Snx5Q9D8U8 404 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Ascc1Q9D8Z1 356 aaKnown RBP13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Trpm1Q2TV84 1622 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Kidins220E9Q9B7 1793 aa13.43□□□□□ -0.26
Vps4b-201ENSMUST00000094646 Lrrc23O35125 340 aa13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms