RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Znf366Q6NS86 746 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Rnf220Q6PDX6 566 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Adam29Q811Q4 763 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Edem2Q8BJT9 577 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ccdc151Q8BSN3 593 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 CcinQ8CDE2 588 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Pank3Q8R2W9 370 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Fbxo21Q8VDH1 627 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Zcchc14Q8VIG0 956 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Trim12aQ99PQ1 284 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Znhit3Q9CQK1 151 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Sppl3Q9CUS9 384 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ppa1Q9D819 289 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 P33monoxQ9DBN4 303 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Kcnh7Q9ER47 1195 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 ClpxQ9JHS4 634 aaKnown RBP9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Apobec2Q9WV35 224 aa9.6□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Lrrc72A0A1Y7VMI0 288 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Kdf1A2A9F4 397 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Rhox1B1APN4 224 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Vmn1r88E9Q235 316 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Usp17ldG5E8G2 545 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Usp17lcG5E8I7 545 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gm21833J3QPK1 500 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ptch2O35595 1182 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Tesk1O70146 627 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Dync1i1O88485 628 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Zfy2P20662 777 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Xrcc5P27641 732 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Psmc6P62334 389 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Msx3P70354 204 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Adcy8P97490 1249 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ehmt1Q5DW34 1296 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 CoilQ5SU73 570 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Nlrp14Q6B966 993 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Sp140Q6NSQ5 534 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Olfr814Q7TRH4 310 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Hspa13Q8BM72 471 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 HnrnpabQ99020 285 aaKnown RBP9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Micu3Q9CTY5 523 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Dcdc2cQ9D1B8 347 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Clec3aQ9EPW4 196 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gal3st1Q9JHE4 423 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Shcbp1Q9Z179 668 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 PrxO55103 1391 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Adamtsl1Q8BLI0 1745 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Slc4a9E9PUP3 929 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Gm10608E9PZ13 166 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Pms2P54279 859 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 JupQ02257 745 aaKnown RBP9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Fam171bQ14CH0 825 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Q4VA45 678 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 GstcdQ5RL51 634 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Snx19Q6P4T1 997 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Serpina12Q7TMF5 413 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 AmphQ7TQF7 686 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Ankrd24Q80VM7 985 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Serpina3fQ80X76 445 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Srp68Q8BMA6 625 aaKnown RBP9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 GancQ8BVW0 898 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Klhl2Q8JZP3 593 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Mtmr6Q8VE11 617 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Lrrc49Q91YK0 686 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Mrpl28Q9D1B9 257 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Uba2Q9Z1F9 638 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Map2P20357 1828 aa9.59□□□□□ -0.87
Upf3b-201ENSMUST00000076265 Atf7ipQ7TT18 1306 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mdc1Q5PSV9 1707 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Gm45140A0A0N4SUM8 220 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 5830411N06RikB3F5L4 1112 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Prr22F6TNE3 422 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cyp4f40G3UW81 524 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Exoc4O35382 975 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Il13ra2O88786 383 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cd4P06332 457 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Hoxc9P09633 260 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Vcam1P29533 739 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Polr2gP62488 172 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pou3f4P62515 361 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Trat1Q3UU67 187 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Hand2Q61039 217 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pcsk7Q61139 770 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Dnajc8Q6NZB0 253 aaKnown RBP9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Camk2dQ6PHZ2 499 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 B430306N03RikQ6QX36 289 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Fbxo22Q78JE5 402 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Fsd1Q7TPM6 496 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Pnma1Q8C1C8 353 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 C1sbQ8CFG8 688 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 C1saQ8CG14 688 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Rftn2Q8CHX7 500 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 N4bp2l2Q8JZS6 575 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Mnd1Q8K396 205 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Lmcd1Q8VEE1 365 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Olfr801Q8VEU1 318 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 WacQ924H7 646 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 KlbQ99N32 1043 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 1700029P11RikQ9CQ68 150 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Cd274Q9EP73 290 aa9.58□□□□□ -0.88
Upf3b-201ENSMUST00000076265 Krt17Q9QWL7 433 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms