RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Elk4P41158 430 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Vamp7P70280 220 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Taf1bP97358 586 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Mettl17Q3U2U7 461 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Smcr8Q3UMB5 935 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Ush1gQ80T11 461 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Krt75Q8BGZ7 551 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Epn2Q8CHU3 595 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Scrn2Q8VCA8 425 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Akt1s1Q9D1F4 257 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Cmtm5Q9D6G9 156 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Sertad2Q9JJG5 309 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Hey2Q9QUS4 339 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Chek2Q9Z265 546 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Gm8257E9Q8R3 264 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Mboat4P0C7A3 435 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Pcyt1aP49586 367 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 UrosP51163 265 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Siah1aP61092 282 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Mcm9Q2KHI9 1134 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Fnip2Q80TD3 1108 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Slc17a6Q8BLE7 582 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Tmem74Q8BQU7 305 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Adprhl2Q8CG72 370 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Cdk17Q8K0D0 523 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Trim60Q8VI40 466 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Mtmr4Q91XS1 1190 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 KlbQ99N32 1043 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Ddah1Q9CWS0 285 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 PnkpQ9JLV6 522 aaKnown RBP11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Sfmbt1Q9JMD1 863 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Col22a1E9Q7P1 1613 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Gm4841E9QAA8 417 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Rad51ap2G3UW63 976 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Slc27a3O88561 667 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Akap10O88845 662 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 PorP37040 678 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Gm29609Q3UU56 907 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Lrrc47Q505F5 581 aaKnown RBP11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 PRAG1Q571I4 1179 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Nemp1Q6ZQE4 437 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Frmd4aQ8BIE6 1020 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Gtf3c2Q8BL74 907 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Rhpn2Q8BWR8 686 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Bhmt2Q91WS4 363 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Necab2Q91ZP9 389 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 SmtnQ921U8 923 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Trmt44Q9D2Q2 713 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 KelQ9EQF2 713 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Gadd45gQ9Z111 159 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Serpinb3aG3X9V8 387 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 OmdO35103 423 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 AoahO35298 574 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Per2O54943 1257 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Top3aO70157 1003 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Dclk2Q6PGN3 756 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Ntrk3Q6VNS1 825 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Dusp4Q8BFV3 398 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 DcakdQ8BHC4 231 aaKnown RBP11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Robo4Q8C310 1012 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Gstt4Q9D4P7 240 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Ubxn11Q9D572 484 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Serpina9Q9D7D2 418 aa11.16□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Scgb2b21A0A087WQA9 112 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Chrna9G3X8Z7 479 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Pik3r2O08908 722 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 PolgP54099 1218 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Zhx2Q8C0C0 836 aaKnown RBP11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 PawrQ925B0 333 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Lpin3Q99PI4 848 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 NkapQ9D0F4 415 aaKnown RBP11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 AuhQ9JLZ3 314 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Atp6v1c1Q9Z1G3 382 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Pcna-ps2A0A140T8V5 261 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Klhdc7aA2APT9 773 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Ttc7bE9Q6P5 843 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Gm3460E9QAI8 215 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Tnfrsf11aO35305 625 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 DcxO88809 366 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 PcnaP17918 261 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Krt80Q0VBK2 452 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 YdjcQ14BV6 310 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Ubtfl1Q3USZ2 394 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Ampd1Q3V1D3 745 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Kiaa0319Q5SZV5 1081 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Caprin1Q60865 707 aaKnown RBP11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 AsnsQ61024 561 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 GmipQ6PGG2 971 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Fam102aQ78T81 392 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Btbd10Q80X66 475 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Senp7Q8BUH8 1037 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Slc51aQ8R000 340 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 St13Q99L47 371 aaKnown RBP11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 SncaipQ99ME3 962 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Fam187aQ9D3R5 417 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Rhobtb1Q9DAK3 695 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Ptpn4Q9WU22 926 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Zfyve9A2A8R0 1397 aa11.15□□□□□ -0.62
Rnf40-201ENSMUST00000033088 Lrp5Q91VN0 1614 aa11.15□□□□□ -0.63
Rnf40-201ENSMUST00000033088 Tbc1d16A2ABG4 766 aa11.15□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms