RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Otud5Q3U2S4 566 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ccdc33Q3ULW6 985 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Znf697Q569E7 569 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 HpseQ6YGZ1 535 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Trpv1Q704Y3 839 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Mical2Q8BML1 960 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Daam1Q8BPM0 1077 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Cd300ldQ8VCH2 221 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Rnf138rt1Q9D9M9 248 aa13.39□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Mocs3A2BDX3 460 aaKnown RBP13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Mroh5E9PUJ8 762 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Pcdh9F8VPK8 1237 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Hmgcs2P54869 508 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Kcnn2P58390 839 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Lpar1P61793 364 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Tfdp1Q08639 410 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 TraddQ3U0V2 310 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Npdc1Q64322 332 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Dnajc8Q6NZB0 253 aaKnown RBP13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 C2cd5Q7TPS5 1016 aaKnown RBP13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Apol7cQ8C6E1 369 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Stxbp5Q8K400 1152 aaKnown RBP13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Dis3Q9CSH3 958 aaKnown RBP13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Prss23Q9D6X6 382 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 PigoQ9JJI6 1093 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Pard6bQ9JK83 371 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Hsd17b14E9Q3D4 273 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Shoc2O88520 582 aaKnown RBP13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Magea6O89010 325 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Cdh8P97291 799 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ddr1Q03146 911 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Nt5dc3Q3UHB1 546 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Lrrc14bQ3UJB3 510 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gbp4Q61107 620 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Tdpoz4Q6YCH2 370 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Phka2Q8BWJ3 1235 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Q8CD60 292 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Mcoln2Q8K595 566 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 OscarQ8VBT3 265 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Fbxo33Q8VE08 562 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Rin1Q921Q7 763 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Dpp3Q99KK7 738 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Tas1r1Q99PG6 842 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 MlklQ9D2Y4 472 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Znf654Q9DAU9 571 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 PrccQ9EQC8 491 aaKnown RBP13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Hic1Q9R1Y5 733 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Pck1Q9Z2V4 622 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gon4lQ9DB00 2260 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Nup62clA2AG10 272 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ppp1r36D3Z0R2 411 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Adgrf2E9Q4J9 644 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Diaph2O70566 1098 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Rab21P35282 222 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 GsapQ3TCV3 858 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Lrch2Q3UMG5 773 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Itga1Q3V3R4 1179 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Serpinb6Q60854 378 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 PrcpQ7TMR0 491 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 OafQ8QZR4 282 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ero1bQ8R2E9 467 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Usp33Q8R5K2 909 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 TarsQ9D0R2 722 aaKnown RBP13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Htra2Q9JIY5 458 aa13.38□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gm9774A0A0A6YVU8 407 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gm7086A0A1W2P766 342 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 AspgA0JNU3 564 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Card9A2AIV8 536 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gm16430A6X8J1 155 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Fgf15O35622 218 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Vti1aO89116 217 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Rasgrf1P27671 1262 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ccr1P51675 355 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Clcn3P51791 818 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Psmc4P54775 418 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Gabrb2P63137 512 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Trim43bP86448 445 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Cnga4Q3UW12 575 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Rcsd1Q3UZA1 412 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Atg9bQ6EBV9 922 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Rpf1Q7TND5 349 aaKnown RBP13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Slc38a7Q8BWH0 463 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Vopp1Q8R1C3 172 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Trim60Q8VI40 466 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Nek8Q91ZR4 698 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Traf7Q922B6 594 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 4930550L24RikQ99PA7 320 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Med7Q9CZB6 233 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Slxl1Q9D515 155 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 0610012G03RikA0A0J9YTR2 95 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Vwa5b1A9Z1V5 1215 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Celf5D3Z4T1 395 aaKnown RBP13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 F6Y6L6 278 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Kng1O08677 661 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ripk2P58801 539 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 StamP70297 548 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Plk1Q07832 603 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Ecm1Q61508 559 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Klhl17Q6TDP3 640 aa13.37□□□□□ -0.27
Rnf4-201ENSMUST00000030992 Olfr670Q7TRP3 312 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms