RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeastyeast

Gene YOP1, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOP1YPR028W AHC2P25649 128 aa0.68□□□□□ -2.3
YOP1YPR028W ATP7P30902 174 aa0.68□□□□□ -2.3
YOP1YPR028W YEL008WP40001 126 aa0.68□□□□□ -2.3
YOP1YPR028W GPI14P47088 403 aaKnown RBP0.68□□□□□ -2.3
YOP1YPR028W SNO1Q03144 224 aa0.68□□□□□ -2.3
YOP1YPR028W DIG2Q03373 323 aaKnown RBP0.68□□□□□ -2.3
YOP1YPR028W DAS2Q12084 232 aa0.68□□□□□ -2.3
YOP1YPR028W YOR015WQ12169 119 aa0.68□□□□□ -2.3
YOP1YPR028W SEC14P24280 304 aaKnown RBP0.67□□□□□ -2.3
YOP1YPR028W YCL042WP25572 119 aa0.67□□□□□ -2.3
YOP1YPR028W STP22P25604 385 aa0.67□□□□□ -2.3
YOP1YPR028W YKL102CP34249 101 aa0.67□□□□□ -2.3
YOP1YPR028W RPL37AP49166 88 aaKnown RBP0.67□□□□□ -2.3
YOP1YPR028W SBH1P52870 82 aa0.67□□□□□ -2.3
YOP1YPR028W PIR1Q03178 341 aa0.67□□□□□ -2.3
YOP1YPR028W RRP17Q04031 235 aaPredicted RBP0.67□□□□□ -2.3
YOP1YPR028W GPI17Q04080 534 aa0.67□□□□□ -2.3
YOP1YPR028W HPT1Q04178 221 aaKnown RBP0.67□□□□□ -2.3
YOP1YPR028W ATP20Q12233 115 aa0.67□□□□□ -2.3
YOP1YPR028W DGK1Q12382 290 aa0.67□□□□□ -2.3
YOP1YPR028W GCY1P14065 312 aaKnown RBP RIP-Chip data0.66□□□□□ -2.3not detected
YOP1YPR028W STF2P16965 84 aa0.66□□□□□ -2.3
YOP1YPR028W RRT1P38192 103 aa0.66□□□□□ -2.3
YOP1YPR028W NVJ1P38881 321 aa0.66□□□□□ -2.3
YOP1YPR028W SEC72P39742 193 aaKnown RBP0.66□□□□□ -2.3
YOP1YPR028W HUA1P40325 198 aa0.66□□□□□ -2.3
YOP1YPR028W RFC2P40348 353 aa0.66□□□□□ -2.3
YOP1YPR028W JAC1P53193 184 aa0.66□□□□□ -2.3
YOP1YPR028W YLR460CP54007 376 aa0.66□□□□□ -2.3
YOP1YPR028W VPS28Q02767 242 aa0.66□□□□□ -2.3
YOP1YPR028W DML1Q03652 475 aa0.66□□□□□ -2.3
YOP1YPR028W BRX1Q08235 291 aaKnown RBP0.66□□□□□ -2.3
YOP1YPR028W COA3Q3E7B2 85 aa0.66□□□□□ -2.3
YOP1YPR028W SEN2P16658 377 aa0.65□□□□□ -2.31
YOP1YPR028W HSP30P25619 332 aa0.65□□□□□ -2.31
YOP1YPR028W UBC8P28263 218 aa0.65□□□□□ -2.31
YOP1YPR028W TRR1P29509 319 aaKnown RBP0.65□□□□□ -2.31
YOP1YPR028W YBL010CP32788 280 aa0.65□□□□□ -2.31
YOP1YPR028W CLG1P35190 452 aa0.65□□□□□ -2.31
YOP1YPR028W YKR041WP36134 250 aa0.65□□□□□ -2.31
YOP1YPR028W POG1P40473 351 aa0.65□□□□□ -2.31
YOP1YPR028W SBH2P52871 88 aa0.65□□□□□ -2.31
YOP1YPR028W YGL235WP53071 178 aa0.65□□□□□ -2.31
YOP1YPR028W TIM13P53299 105 aa0.65□□□□□ -2.31
YOP1YPR028W MET31Q03081 177 aa0.65□□□□□ -2.31
YOP1YPR028W PLP1Q04004 230 aa0.65□□□□□ -2.31
YOP1YPR028W YHP1Q04116 353 aa0.65□□□□□ -2.31
YOP1YPR028W YDR391CQ04170 232 aa0.65□□□□□ -2.31
YOP1YPR028W GAL83Q04739 417 aa0.65□□□□□ -2.31
YOP1YPR028W UPS1Q05776 175 aa0.65□□□□□ -2.31
YOP1YPR028W ATG38Q05789 226 aaKnown RBP0.65□□□□□ -2.31
YOP1YPR028W FYV12Q08559 129 aa0.65□□□□□ -2.31
YOP1YPR028W YMR030W-AQ3E760 96 aa0.65□□□□□ -2.31
YOP1YPR028W MAK31P23059 88 aa0.64□□□□□ -2.31
YOP1YPR028W YRA2P36036 203 aaKnown RBP RIP-Chip data0.64□□□□□ -2.31not detected
YOP1YPR028W MRPL15P36523 253 aa0.64□□□□□ -2.31
YOP1YPR028W MAK5P38112 773 aaPredicted RBP0.64□□□□□ -2.31
YOP1YPR028W YBR242WP38331 238 aa0.64□□□□□ -2.31
YOP1YPR028W MPM1P40364 252 aa0.64□□□□□ -2.31
YOP1YPR028W NSE4P43124 402 aa0.64□□□□□ -2.31
YOP1YPR028W XPT1P47165 209 aa0.64□□□□□ -2.31
YOP1YPR028W TTI2P47168 421 aa0.64□□□□□ -2.31
YOP1YPR028W YKR005CQ02203 525 aa0.64□□□□□ -2.31
YOP1YPR028W YPR127WQ06494 345 aa0.64□□□□□ -2.31
YOP1YPR028W ATG41Q12048 136 aa0.64□□□□□ -2.31
YOP1YPR028W YOR214CQ12282 236 aa0.64□□□□□ -2.31
YOP1YPR028W PST2Q12335 198 aaKnown RBP0.64□□□□□ -2.31
YOP1YPR028W YOR381W-AQ3E804 55 aa0.64□□□□□ -2.31
YOP1YPR028W AHT1P29589 182 aa0.63□□□□□ -2.31
YOP1YPR028W ETR1P38071 380 aa0.63□□□□□ -2.31
YOP1YPR028W FYV4P38783 130 aaPredicted RBP0.63□□□□□ -2.31
YOP1YPR028W EGD2P38879 174 aaKnown RBP0.63□□□□□ -2.31
YOP1YPR028W SRP14P38985 146 aa0.63□□□□□ -2.31
YOP1YPR028W YNL200CP40165 246 aaKnown RBP0.63□□□□□ -2.31
YOP1YPR028W CCS1P40202 249 aaKnown RBP0.63□□□□□ -2.31
YOP1YPR028W GLR1P41921 483 aaKnown RBP0.63□□□□□ -2.31
YOP1YPR028W HHT1P61830 136 aa0.63□□□□□ -2.31
YOP1YPR028W YPR203WQ08994 102 aa0.63□□□□□ -2.31
YOP1YPR028W YLR050CQ12155 161 aaKnown RBP0.63□□□□□ -2.31
YOP1YPR028W PEX11Q12462 236 aa0.63□□□□□ -2.31
YOP1YPR028W TAR1Q8TGM6 124 aa0.63□□□□□ -2.31
YOP1YPR028W RAD6P06104 172 aa0.62□□□□□ -2.31
YOP1YPR028W RAD51P25454 400 aa0.62□□□□□ -2.31
YOP1YPR028W NUF2P33895 451 aa0.62□□□□□ -2.31
YOP1YPR028W YIP3P53633 176 aa0.62□□□□□ -2.31
YOP1YPR028W RIM9Q04734 239 aa0.62□□□□□ -2.31
YOP1YPR028W ELP6Q04868 273 aa0.62□□□□□ -2.31
YOP1YPR028W GRE1Q08969 168 aa0.62□□□□□ -2.31
YOP1YPR028W CMD1P06787 147 aaKnown RBP0.61□□□□□ -2.31
YOP1YPR028W CPR5P35176 225 aa0.61□□□□□ -2.31
YOP1YPR028W YHL037CP38733 133 aa0.61□□□□□ -2.31
YOP1YPR028W MOB1P40484 314 aa0.61□□□□□ -2.31
YOP1YPR028W PAC10P48363 199 aa0.61□□□□□ -2.31
YOP1YPR028W SOL1P50278 321 aa0.61□□□□□ -2.31
YOP1YPR028W RPL37BP51402 88 aaKnown RBP0.61□□□□□ -2.31
YOP1YPR028W FIT1Q04433 528 aa0.61□□□□□ -2.31
YOP1YPR028W LCL2Q08045 131 aa0.61□□□□□ -2.31
YOP1YPR028W HRD1Q08109 551 aa0.61□□□□□ -2.31
YOP1YPR028W YER188C-AP0C0V2 99 aa0.6□□□□□ -2.31
YOP1YPR028W VPS51P36116 164 aa0.6□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms