RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFI1	YPL254W	SAG1	P20840	650 aa		4.6	□□□□□ -1.67
HFI1	YPL254W	LSB5	P25369	354 aa		4.6	□□□□□ -1.67
HFI1	YPL254W	MCH2	P36032	473 aa		4.6	□□□□□ -1.67
HFI1	YPL254W	WSS1	P38838	269 aa		4.6	□□□□□ -1.67
HFI1	YPL254W	SMD3	P43321	101 aa	Known RBP	4.6	□□□□□ -1.67
HFI1	YPL254W	ERV14	P53173	138 aa		4.6	□□□□□ -1.67
HFI1	YPL254W	PDR17	P53844	350 aa		4.6	□□□□□ -1.67
HFI1	YPL254W	YFH1	Q07540	174 aa		4.6	□□□□□ -1.67
HFI1	YPL254W	RFU1	Q08003	200 aa		4.6	□□□□□ -1.67
HFI1	YPL254W	GRE1	Q08969	168 aa		4.6	□□□□□ -1.67
HFI1	YPL254W	USB1	Q12208	290 aa	Known RBP	4.6	□□□□□ -1.67
HFI1	YPL254W	DCN1	Q12395	269 aa		4.6	□□□□□ -1.67
HFI1	YPL254W	YIL134C-A	Q45U18	67 aa		4.6	□□□□□ -1.67
HFI1	YPL254W	POL2	P21951	2222 aa	Known RBP	4.6	□□□□□ -1.67
HFI1	YPL254W	CBP6	P07253	162 aa	Predicted RBP	4.59	□□□□□ -1.67
HFI1	YPL254W	IMP1	P28627	190 aa		4.59	□□□□□ -1.67
HFI1	YPL254W	CUE1	P38428	203 aa		4.59	□□□□□ -1.67
HFI1	YPL254W	PCL7	P40186	285 aa		4.59	□□□□□ -1.67
HFI1	YPL254W	CCS1	P40202	249 aa	Known RBP	4.59	□□□□□ -1.67
HFI1	YPL254W	YGR269W	P40326	108 aa		4.59	□□□□□ -1.67
HFI1	YPL254W	PAU5	P43575	122 aa		4.59	□□□□□ -1.67
HFI1	YPL254W	BLM10	P43583	2143 aa		4.59	□□□□□ -1.67
HFI1	YPL254W	ATG27	P46989	271 aa		4.59	□□□□□ -1.67
HFI1	YPL254W	XPT1	P47165	209 aa		4.59	□□□□□ -1.67
HFI1	YPL254W	YGR149W	P48236	432 aa		4.59	□□□□□ -1.67
HFI1	YPL254W	GEP7	P53171	287 aa		4.59	□□□□□ -1.67
HFI1	YPL254W	RIM9	Q04734	239 aa		4.59	□□□□□ -1.67
HFI1	YPL254W	FRQ1	Q06389	190 aa		4.59	□□□□□ -1.67
HFI1	YPL254W	ARR2	Q06597	130 aa		4.59	□□□□□ -1.67
HFI1	YPL254W	SEC16	P48415	2195 aa	Known RBP	4.59	□□□□□ -1.68
HFI1	YPL254W	PAU19	P0CE85	124 aa		4.58	□□□□□ -1.68
HFI1	YPL254W	PAU21	P0CE86	164 aa		4.58	□□□□□ -1.68
HFI1	YPL254W	PAU22	P0CE87	164 aa		4.58	□□□□□ -1.68
HFI1	YPL254W	URA5	P13298	226 aa	Known RBP	4.58	□□□□□ -1.68
HFI1	YPL254W	FCY2	P17064	533 aa		4.58	□□□□□ -1.68
HFI1	YPL254W	PAU3	P25610	124 aa		4.58	□□□□□ -1.68
HFI1	YPL254W	MRPS5	P33759	307 aa		4.58	□□□□□ -1.68
HFI1	YPL254W	OST1	P41543	476 aa	Known RBP	4.58	□□□□□ -1.68
HFI1	YPL254W	LOC1	P43586	204 aa	Predicted RBP	4.58	□□□□□ -1.68
HFI1	YPL254W	NRM1	P53718	249 aa		4.58	□□□□□ -1.68
HFI1	YPL254W	YMR007W	Q03675	126 aa		4.58	□□□□□ -1.68
HFI1	YPL254W	PAM18	Q07914	168 aa		4.58	□□□□□ -1.68
HFI1	YPL254W	YOR292C	Q08743	309 aa		4.58	□□□□□ -1.68
HFI1	YPL254W	YNR034W-A	Q3E841	98 aa		4.58	□□□□□ -1.68
HFI1	YPL254W	ATG40	Q99325	256 aa		4.58	□□□□□ -1.68
HFI1	YPL254W	NHP6A	P11632	93 aa	Known RBP	4.57	□□□□□ -1.68
HFI1	YPL254W	MRPL44	P19956	98 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	ATG15	P25641	520 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	YUH1	P35127	236 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	QDR3	P38227	689 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	YMR262W	P38430	313 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	MTC6	P38849	526 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	YIL029C	P40538	142 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	ECO1	P43605	281 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	LST7	P53237	242 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	WSC2	P53832	503 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	HCH1	P53834	153 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	DAD3	P69850	94 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	ECM18	Q04623	453 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	MHR1	Q06630	226 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	YOL029C	Q08187	201 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	AKR2	Q12013	749 aa		4.57	□□□□□ -1.68
HFI1	YPL254W	POC4	Q12245	148 aa	Predicted RBP	4.57	□□□□□ -1.68
HFI1	YPL254W	ACC1	Q00955	2233 aa	Known RBP	4.57	□□□□□ -1.68
HFI1	YPL254W	YDR157W	A0A023PZE8	133 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	RPS25B	P0C0T4	108 aa	Known RBP	4.56	□□□□□ -1.68
HFI1	YPL254W	FUN14	P18411	198 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	YBL059W	P34224	193 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	NTC20	P38302	140 aa	Predicted RBP	4.56	□□□□□ -1.68
HFI1	YPL254W	SUR2	P38992	349 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	NSA2	P40078	261 aa	Known RBP	4.56	□□□□□ -1.68
HFI1	YPL254W	TTI2	P47168	421 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	OST3	P48439	350 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	YGR050C	P53231	118 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	YVH1	Q02256	364 aa	Known RBP	4.56	□□□□□ -1.68
HFI1	YPL254W	YPL077C	Q02831	240 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	YDR114C	Q04597	100 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	YLR179C	Q06252	201 aa	Known RBP	4.56	□□□□□ -1.68
HFI1	YPL254W	PIN3	Q06449	215 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	NAT3	Q06504	195 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	RAF1	Q06891	181 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	FIT3	Q08907	204 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	YOP1	Q12402	180 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	RPS25A	Q3E792	108 aa	Predicted RBP	4.56	□□□□□ -1.68
HFI1	YPL254W	CDC39	P25655	2108 aa	Known RBP	4.56	□□□□□ -1.68
HFI1	YPL254W	YGL010W	P25338	174 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	MRPL11	P36521	249 aa	Predicted RBP	4.56	□□□□□ -1.68
HFI1	YPL254W	ARP3	P47117	449 aa	Known RBP	4.56	□□□□□ -1.68
HFI1	YPL254W	YIP5	P53108	310 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	RCE1	Q03530	315 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	YLR281C	Q05863	155 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	YDL180W	Q12301	547 aa		4.56	□□□□□ -1.68
HFI1	YPL254W	QCR9	P22289	66 aa		4.55	□□□□□ -1.68
HFI1	YPL254W	DAD2	P36162	133 aa		4.55	□□□□□ -1.68
HFI1	YPL254W	ICS2	P38284	255 aa		4.55	□□□□□ -1.68
HFI1	YPL254W	HSP10	P38910	106 aa		4.55	□□□□□ -1.68
HFI1	YPL254W	YIL163C	P40448	117 aa		4.55	□□□□□ -1.68
HFI1	YPL254W	DFG10	P40526	253 aa		4.55	□□□□□ -1.68
HFI1	YPL254W	AIM24	P47127	394 aa		4.55	□□□□□ -1.68
HFI1	YPL254W	RIB4	P50861	169 aa	Predicted RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms