RNA–Protein interactions for RNA: YOR224C

RPB8, Transcript of RNA polymerase subunit ABC14.5, yeastyeast

Gene RPB8, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB8YOR224C YNR073CP0CX09 502 aa2.19□□□□□ -2.06
RPB8YOR224C MRP1P10662 321 aaKnown RBP2.19□□□□□ -2.06
RPB8YOR224C MRPS28P21771 286 aa2.19□□□□□ -2.06
RPB8YOR224C AHC2P25649 128 aa2.19□□□□□ -2.06
RPB8YOR224C ERG2P32352 222 aa2.19□□□□□ -2.06
RPB8YOR224C DOA4P32571 926 aa2.19□□□□□ -2.06
RPB8YOR224C SUA5P32579 426 aa2.19□□□□□ -2.06
RPB8YOR224C PAU2P32612 120 aa2.19□□□□□ -2.06
RPB8YOR224C CLB6P32943 380 aa2.19□□□□□ -2.06
RPB8YOR224C CLG1P35190 452 aa2.19□□□□□ -2.06
RPB8YOR224C SSH1P38353 490 aaKnown RBP2.19□□□□□ -2.06
RPB8YOR224C PRS3P38689 320 aaKnown RBP2.19□□□□□ -2.06
RPB8YOR224C SUR2P38992 349 aa2.19□□□□□ -2.06
RPB8YOR224C DDI1P40087 428 aa2.19□□□□□ -2.06
RPB8YOR224C DLS1P40366 167 aa2.19□□□□□ -2.06
RPB8YOR224C FLX1P40464 311 aa2.19□□□□□ -2.06
RPB8YOR224C CDC40P40968 455 aaPredicted RBP2.19□□□□□ -2.06
RPB8YOR224C YJL016WP47072 561 aa2.19□□□□□ -2.06
RPB8YOR224C YAE1P47118 141 aaPredicted RBP2.19□□□□□ -2.06
RPB8YOR224C GAL83Q04739 417 aa2.19□□□□□ -2.06
RPB8YOR224C NMA1Q06178 401 aaKnown RBP2.19□□□□□ -2.06
RPB8YOR224C BER1Q06688 274 aaKnown RBP2.19□□□□□ -2.06
RPB8YOR224C YLR099W-AQ3E798 87 aa2.19□□□□□ -2.06
RPB8YOR224C NUM1Q00402 2748 aa2.18□□□□□ -2.06
RPB8YOR224C ADK1P07170 222 aaKnown RBP2.18□□□□□ -2.06
RPB8YOR224C COX9P07255 59 aa2.18□□□□□ -2.06
RPB8YOR224C SGA1P08019 549 aa2.18□□□□□ -2.06
RPB8YOR224C SFK1P35735 353 aa2.18□□□□□ -2.06
RPB8YOR224C RCN1P36054 211 aa2.18□□□□□ -2.06
RPB8YOR224C SHE2P36068 246 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
RPB8YOR224C YJL218WP40892 196 aaKnown RBP2.18□□□□□ -2.06
RPB8YOR224C ERJ5P43613 295 aaPredicted RBP2.18□□□□□ -2.06
RPB8YOR224C DOC1P53068 250 aa2.18□□□□□ -2.06
RPB8YOR224C YGL204CP53089 101 aa2.18□□□□□ -2.06
RPB8YOR224C AAH1P53909 347 aa2.18□□□□□ -2.06
RPB8YOR224C NRK1P53915 240 aa2.18□□□□□ -2.06
RPB8YOR224C SED1Q01589 338 aa2.18□□□□□ -2.06
RPB8YOR224C RRP17Q04031 235 aaPredicted RBP2.18□□□□□ -2.06
RPB8YOR224C GPI17Q04080 534 aa2.18□□□□□ -2.06
RPB8YOR224C YDR391CQ04170 232 aa2.18□□□□□ -2.06
RPB8YOR224C RRS1Q08746 203 aaKnown RBP2.18□□□□□ -2.06
RPB8YOR224C MATALPHA1P0CY06 175 aa2.17□□□□□ -2.06
RPB8YOR224C HMLALPHA1P0CY07 175 aa2.17□□□□□ -2.06
RPB8YOR224C RPL30P14120 105 aaKnown RBP2.17□□□□□ -2.06
RPB8YOR224C DPB2P24482 689 aaPredicted RBP2.17□□□□□ -2.06
RPB8YOR224C YCL042WP25572 119 aa2.17□□□□□ -2.06
RPB8YOR224C ERG24P32462 438 aaKnown RBP2.17□□□□□ -2.06
RPB8YOR224C FMP23P38231 175 aa2.17□□□□□ -2.06
RPB8YOR224C YER121WP40076 114 aa2.17□□□□□ -2.06
RPB8YOR224C YGL159WP53110 370 aa2.17□□□□□ -2.06
RPB8YOR224C CPD1P53314 239 aa2.17□□□□□ -2.06
RPB8YOR224C HHT1P61830 136 aa2.17□□□□□ -2.06
RPB8YOR224C YMR279CQ03263 540 aa2.17□□□□□ -2.06
RPB8YOR224C GRH1Q04410 372 aaKnown RBP2.17□□□□□ -2.06
RPB8YOR224C YLR283WQ05867 314 aa2.17□□□□□ -2.06
RPB8YOR224C HEM25Q07534 307 aa2.17□□□□□ -2.06
RPB8YOR224C RFU1Q08003 200 aa2.17□□□□□ -2.06
RPB8YOR224C USB1Q12208 290 aaKnown RBP2.17□□□□□ -2.06
RPB8YOR224C FMP16Q12497 93 aa2.17□□□□□ -2.06
RPB8YOR224C ISD11Q6Q560 94 aa2.17□□□□□ -2.06
RPB8YOR224C QCR7P00128 127 aa2.16□□□□□ -2.06
RPB8YOR224C TDH1P00360 332 aaKnown RBP2.16□□□□□ -2.06
RPB8YOR224C YBL010CP32788 280 aa2.16□□□□□ -2.06
RPB8YOR224C SNC2P33328 115 aa2.16□□□□□ -2.06
RPB8YOR224C TMA19P35691 167 aaKnown RBP2.16□□□□□ -2.06
RPB8YOR224C BUD25P85052 153 aa2.16□□□□□ -2.06
RPB8YOR224C YKR005CQ02203 525 aa2.16□□□□□ -2.06
RPB8YOR224C YDC1Q02896 317 aa2.16□□□□□ -2.06
RPB8YOR224C SRL4Q03085 281 aa2.16□□□□□ -2.06
RPB8YOR224C ATC1Q04005 294 aa2.16□□□□□ -2.06
RPB8YOR224C YPR098CQ06089 161 aa2.16□□□□□ -2.06
RPB8YOR224C ATG41Q12048 136 aa2.16□□□□□ -2.06
RPB8YOR224C SUS1Q6WNK7 96 aa2.16□□□□□ -2.06
RPB8YOR224C REP2P03872 296 aa2.15□□□□□ -2.07
RPB8YOR224C RPL39P04650 51 aa2.15□□□□□ -2.07
RPB8YOR224C HOM6P31116 359 aaKnown RBP2.15□□□□□ -2.07
RPB8YOR224C UTP11P34247 250 aaPredicted RBP2.15□□□□□ -2.07
RPB8YOR224C UMP1P38293 148 aa2.15□□□□□ -2.07
RPB8YOR224C LSM4P40070 187 aaKnown RBP2.15□□□□□ -2.07
RPB8YOR224C GLR1P41921 483 aaKnown RBP2.15□□□□□ -2.07
RPB8YOR224C SER2P42941 309 aa2.15□□□□□ -2.07
RPB8YOR224C BNA6P43619 295 aa2.15□□□□□ -2.07
RPB8YOR224C GPI14P47088 403 aaKnown RBP2.15□□□□□ -2.07
RPB8YOR224C CWC23P52868 283 aaPredicted RBP2.15□□□□□ -2.07
RPB8YOR224C NSA1P53136 463 aaPredicted RBP2.15□□□□□ -2.07
RPB8YOR224C ERV29P53337 310 aa2.15□□□□□ -2.07
RPB8YOR224C CTF19Q02732 369 aa2.15□□□□□ -2.07
RPB8YOR224C YDR248CQ03786 193 aa2.15□□□□□ -2.07
RPB8YOR224C YOR283WQ12040 230 aaKnown RBP2.15□□□□□ -2.07
RPB8YOR224C MSH5Q12175 901 aa2.15□□□□□ -2.07
RPB8YOR224C HUT1Q12520 339 aa2.15□□□□□ -2.07
RPB8YOR224C ODC2Q99297 307 aa2.15□□□□□ -2.07
RPB8YOR224C Q0297Q9ZZV8 51 aa2.15□□□□□ -2.07
RPB8YOR224C BLM10P43583 2143 aa2.14□□□□□ -2.07
RPB8YOR224C CDC28P00546 298 aaKnown RBP2.14□□□□□ -2.07
RPB8YOR224C RPL25P04456 142 aaKnown RBP2.14□□□□□ -2.07
RPB8YOR224C PET494P07390 489 aaPredicted RBP2.14□□□□□ -2.07
RPB8YOR224C HTD2P38790 280 aaKnown RBP2.14□□□□□ -2.07
RPB8YOR224C IPI1P38803 334 aaPredicted RBP2.14□□□□□ -2.07
RPB8YOR224C CTR2P38865 189 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms