RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W MSB2P32334 1306 aa1.3□□□□□ -2.2
SWM2YNR004W GCY1P14065 312 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
SWM2YNR004W NSP1P14907 823 aaKnown RBP1.29□□□□□ -2.2
SWM2YNR004W HSP30P25619 332 aa1.29□□□□□ -2.2
SWM2YNR004W RPB7P34087 171 aa1.29□□□□□ -2.2
SWM2YNR004W GLR1P41921 483 aaKnown RBP1.29□□□□□ -2.2
SWM2YNR004W YFL065CP43539 102 aa1.29□□□□□ -2.2
SWM2YNR004W UPS3Q04006 179 aa1.29□□□□□ -2.2
SWM2YNR004W GRX8Q05926 109 aa1.29□□□□□ -2.2
SWM2YNR004W NAT3Q06504 195 aa1.29□□□□□ -2.2
SWM2YNR004W YOR214CQ12282 236 aa1.29□□□□□ -2.2
SWM2YNR004W YMR030W-AQ3E760 96 aa1.29□□□□□ -2.2
SWM2YNR004W SAC3P46674 1301 aa1.29□□□□□ -2.2
SWM2YNR004W CMD1P06787 147 aaKnown RBP1.28□□□□□ -2.2
SWM2YNR004W YKL102CP34249 101 aa1.28□□□□□ -2.2
SWM2YNR004W MAK5P38112 773 aaPredicted RBP1.28□□□□□ -2.2
SWM2YNR004W NVJ1P38881 321 aa1.28□□□□□ -2.2
SWM2YNR004W YFL019CP43576 117 aa1.28□□□□□ -2.2
SWM2YNR004W YFH7P43591 353 aa1.28□□□□□ -2.2
SWM2YNR004W GPI14P47088 403 aaKnown RBP1.28□□□□□ -2.2
SWM2YNR004W THG1P53215 237 aaKnown RBP1.28□□□□□ -2.2
SWM2YNR004W YNL033WP53964 284 aa1.28□□□□□ -2.2
SWM2YNR004W TMA20P89886 181 aaPredicted RBP1.28□□□□□ -2.2
SWM2YNR004W VPS28Q02767 242 aa1.28□□□□□ -2.2
SWM2YNR004W SNO1Q03144 224 aa1.28□□□□□ -2.2
SWM2YNR004W COX8P04039 78 aa1.27□□□□□ -2.21
SWM2YNR004W RAD51P25454 400 aa1.27□□□□□ -2.21
SWM2YNR004W UBC6P33296 250 aaPredicted RBP1.27□□□□□ -2.21
SWM2YNR004W PAM17P36147 197 aa1.27□□□□□ -2.21
SWM2YNR004W MET31Q03081 177 aa1.27□□□□□ -2.21
SWM2YNR004W STP22P25604 385 aa1.26□□□□□ -2.21
SWM2YNR004W UBC8P28263 218 aa1.26□□□□□ -2.21
SWM2YNR004W YBL010CP32788 280 aa1.26□□□□□ -2.21
SWM2YNR004W CLG1P35190 452 aa1.26□□□□□ -2.21
SWM2YNR004W SRP14P38985 146 aa1.26□□□□□ -2.21
SWM2YNR004W TTI2P47168 421 aa1.26□□□□□ -2.21
SWM2YNR004W YKR005CQ02203 525 aa1.26□□□□□ -2.21
SWM2YNR004W PIR1Q03178 341 aa1.26□□□□□ -2.21
SWM2YNR004W RRP17Q04031 235 aaPredicted RBP1.26□□□□□ -2.21
SWM2YNR004W YHP1Q04116 353 aa1.26□□□□□ -2.21
SWM2YNR004W ATP20Q12233 115 aa1.26□□□□□ -2.21
SWM2YNR004W PEX11Q12462 236 aa1.26□□□□□ -2.21
SWM2YNR004W RAD6P06104 172 aa1.25□□□□□ -2.21
SWM2YNR004W YHL018WP38744 120 aaPredicted RBP1.25□□□□□ -2.21
SWM2YNR004W SBH2P52871 88 aa1.25□□□□□ -2.21
SWM2YNR004W YNL140CP53910 189 aa1.25□□□□□ -2.21
SWM2YNR004W YLR460CP54007 376 aa1.25□□□□□ -2.21
SWM2YNR004W DML1Q03652 475 aa1.25□□□□□ -2.21
SWM2YNR004W GIM5Q04493 163 aa1.25□□□□□ -2.21
SWM2YNR004W RNH202Q05635 350 aa1.25□□□□□ -2.21
SWM2YNR004W YLR053CQ12026 108 aa1.25□□□□□ -2.21
SWM2YNR004W SRP102P36057 244 aaPredicted RBP1.24□□□□□ -2.21
SWM2YNR004W RRT1P38192 103 aa1.24□□□□□ -2.21
SWM2YNR004W YBR242WP38331 238 aa1.24□□□□□ -2.21
SWM2YNR004W YEL067CP39978 195 aa1.24□□□□□ -2.21
SWM2YNR004W PAC10P48363 199 aa1.24□□□□□ -2.21
SWM2YNR004W HHT1P61830 136 aa1.24□□□□□ -2.21
SWM2YNR004W MAK3Q03503 176 aa1.24□□□□□ -2.21
SWM2YNR004W YMR252CQ04814 134 aa1.24□□□□□ -2.21
SWM2YNR004W CMC2Q3E7A4 109 aa1.24□□□□□ -2.21
SWM2YNR004W YKR041WP36134 250 aa1.23□□□□□ -2.21
SWM2YNR004W YEL073CP39974 107 aa1.23□□□□□ -2.21
SWM2YNR004W YNL200CP40165 246 aaKnown RBP1.23□□□□□ -2.21
SWM2YNR004W SBH1P52870 82 aa1.23□□□□□ -2.21
SWM2YNR004W NQM1P53228 333 aaPredicted RBP1.23□□□□□ -2.21
SWM2YNR004W YML079WQ03629 201 aa1.23□□□□□ -2.21
SWM2YNR004W PRE1P22141 198 aaKnown RBP1.22□□□□□ -2.21
SWM2YNR004W AHT1P29589 182 aa1.22□□□□□ -2.21
SWM2YNR004W MRPL15P36523 253 aa1.22□□□□□ -2.21
SWM2YNR004W FES1P38260 290 aa1.22□□□□□ -2.21
SWM2YNR004W CCS1P40202 249 aaKnown RBP1.22□□□□□ -2.21
SWM2YNR004W YGL235WP53071 178 aa1.22□□□□□ -2.21
SWM2YNR004W YDR476CQ03362 224 aa1.22□□□□□ -2.21
SWM2YNR004W GAL83Q04739 417 aa1.22□□□□□ -2.21
SWM2YNR004W YPD1Q07688 167 aa1.22□□□□□ -2.21
SWM2YNR004W HRD1Q08109 551 aa1.22□□□□□ -2.21
SWM2YNR004W YOR381W-AQ3E804 55 aa1.22□□□□□ -2.21
SWM2YNR004W PBI2P0CT04 75 aaKnown RBP1.21□□□□□ -2.22
SWM2YNR004W STF2P16965 84 aa1.21□□□□□ -2.22
SWM2YNR004W MOB1P40484 314 aa1.21□□□□□ -2.22
SWM2YNR004W NSE4P43124 402 aa1.21□□□□□ -2.22
SWM2YNR004W YIP3P53633 176 aa1.21□□□□□ -2.22
SWM2YNR004W DIG2Q03373 323 aaKnown RBP1.21□□□□□ -2.22
SWM2YNR004W YDR391CQ04170 232 aa1.21□□□□□ -2.22
SWM2YNR004W FYV12Q08559 129 aa1.21□□□□□ -2.22
SWM2YNR004W ATG41Q12048 136 aa1.21□□□□□ -2.22
SWM2YNR004W RPL35AP0CX84 120 aaKnown RBP1.2□□□□□ -2.22
SWM2YNR004W RPL35BP0CX85 120 aaKnown RBP1.2□□□□□ -2.22
SWM2YNR004W APA2P22108 325 aa1.2□□□□□ -2.22
SWM2YNR004W FIT2Q08906 153 aa1.2□□□□□ -2.22
SWM2YNR004W RDI1Q12434 202 aa1.2□□□□□ -2.22
SWM2YNR004W COA3Q3E7B2 85 aa1.2□□□□□ -2.22
SWM2YNR004W SPS2P08459 502 aa1.19□□□□□ -2.22
SWM2YNR004W MPM1P40364 252 aa1.19□□□□□ -2.22
SWM2YNR004W YGL101WP53144 215 aa1.19□□□□□ -2.22
SWM2YNR004W TRM3Q07527 1436 aa1.19□□□□□ -2.22
SWM2YNR004W ATG10Q07879 167 aa1.19□□□□□ -2.22
SWM2YNR004W YPR203WQ08994 102 aa1.19□□□□□ -2.22
SWM2YNR004W QCR2P07257 368 aa1.18□□□□□ -2.22
SWM2YNR004W ETR1P38071 380 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 82 ms