RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUB1	YNL016W	FRQ1	Q06389	190 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	DGA1	Q08650	418 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	TIM22	Q12328	207 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	PST2	Q12335	198 aa	Known RBP	3.15	□□□□□ -1.9
PUB1	YNL016W	MPD1	Q12404	318 aa	Known RBP	3.15	□□□□□ -1.9
PUB1	YNL016W	IZH2	Q12442	317 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	RIB3	Q99258	208 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	PET9	P18239	318 aa	Known RBP	3.14	□□□□□ -1.91
PUB1	YNL016W	SPO13	P23624	291 aa		3.14	□□□□□ -1.91
PUB1	YNL016W	SMP1	P38128	452 aa		3.14	□□□□□ -1.91
PUB1	YNL016W	YEA4	P40004	342 aa		3.14	□□□□□ -1.91
PUB1	YNL016W	STB1	P42845	420 aa		3.14	□□□□□ -1.91
PUB1	YNL016W	ARP3	P47117	449 aa	Known RBP	3.14	□□□□□ -1.91
PUB1	YNL016W	YGL101W	P53144	215 aa		3.14	□□□□□ -1.91
PUB1	YNL016W	FMP48	P53233	369 aa		3.14	□□□□□ -1.91
PUB1	YNL016W	HRD1	Q08109	551 aa		3.14	□□□□□ -1.91
PUB1	YNL016W	RPL2A	P0CX45	254 aa	Known RBP	3.13	□□□□□ -1.91
PUB1	YNL016W	RPL2B	P0CX46	254 aa	Known RBP	3.13	□□□□□ -1.91
PUB1	YNL016W	IRC22	P40006	225 aa		3.13	□□□□□ -1.91
PUB1	YNL016W	APQ12	P40532	138 aa		3.13	□□□□□ -1.91
PUB1	YNL016W	GLC8	P41818	229 aa		3.13	□□□□□ -1.91
PUB1	YNL016W	MNN5	P46982	586 aa		3.13	□□□□□ -1.91
PUB1	YNL016W	ALB1	P47019	175 aa	Predicted RBP	3.13	□□□□□ -1.91
PUB1	YNL016W	YGL262W	P53054	175 aa		3.13	□□□□□ -1.91
PUB1	YNL016W	MDM34	P53083	459 aa		3.13	□□□□□ -1.91
PUB1	YNL016W	LSM3	P57743	89 aa	Known RBP	3.13	□□□□□ -1.91
PUB1	YNL016W	TSA2	Q04120	196 aa		3.13	□□□□□ -1.91
PUB1	YNL016W	PAL1	Q05518	499 aa	Known RBP	3.13	□□□□□ -1.91
PUB1	YNL016W	NEJ1	Q06148	342 aa		3.13	□□□□□ -1.91
PUB1	YNL016W	YPR011C	Q12251	326 aa		3.13	□□□□□ -1.91
PUB1	YNL016W	YPS3	Q12303	508 aa		3.13	□□□□□ -1.91
PUB1	YNL016W	PRR2	Q12310	699 aa		3.13	□□□□□ -1.91
PUB1	YNL016W	ATP14	Q12349	124 aa		3.13	□□□□□ -1.91
PUB1	YNL016W	RPL21B	Q12672	160 aa	Known RBP	3.13	□□□□□ -1.91
PUB1	YNL016W	YCL021W-A	Q96VH3	125 aa		3.13	□□□□□ -1.91
PUB1	YNL016W	CDC39	P25655	2108 aa	Known RBP	3.13	□□□□□ -1.91
PUB1	YNL016W	STP22	P25604	385 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	SUI1	P32911	108 aa	Known RBP	3.12	□□□□□ -1.91
PUB1	YNL016W	MEP2	P41948	499 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	RPA43	P46669	326 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	YJR015W	P47090	510 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	CCC1	P47818	322 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	SDT1	P53078	280 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	ACT1	P60010	375 aa	Known RBP	3.12	□□□□□ -1.91
PUB1	YNL016W	GRH1	Q04410	372 aa	Known RBP	3.12	□□□□□ -1.91
PUB1	YNL016W	MRX8	Q05473	314 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	YER078W-A	Q3E7A2	54 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	YBL112C	Q3E7Y4	105 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	HTL1	Q9URQ5	78 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	YCR043C	P25361	127 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	RPC19	P28000	142 aa	Known RBP	3.12	□□□□□ -1.91
PUB1	YNL016W	OCH1	P31755	480 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	SKI6	P46948	246 aa	Predicted RBP	3.12	□□□□□ -1.91
PUB1	YNL016W	YJL028W	P47062	111 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	SOL1	P50278	321 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	SWT21	P53873	357 aa	Predicted RBP	3.12	□□□□□ -1.91
PUB1	YNL016W	RUB1	Q03919	77 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	IRC25	Q07951	179 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	YDL180W	Q12301	547 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	ATG5	Q12380	294 aa		3.12	□□□□□ -1.91
PUB1	YNL016W	YOR304C-A	O14468	76 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	SEC17	P32602	292 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	ASK1	P35734	292 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	UTP30	P36144	274 aa	Known RBP	3.11	□□□□□ -1.91
PUB1	YNL016W	POP4	P38336	279 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	RPF1	P38805	295 aa	Known RBP	3.11	□□□□□ -1.91
PUB1	YNL016W	REE1	P40893	198 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	ECO1	P43605	281 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	BOL2	P53082	120 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	YGL088W	P53151	121 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	ORM1	P53224	222 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	HHT1	P61830	136 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	YPL039W	Q03080	316 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	YMD8	Q03697	442 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	FMN1	Q03778	218 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	LPP1	Q04396	274 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	SDH7	Q04401	133 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	API2	Q04413	109 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	YPR174C	Q06616	221 aa	Predicted RBP	3.11	□□□□□ -1.91
PUB1	YNL016W	NIP7	Q08962	181 aa	Known RBP	3.11	□□□□□ -1.91
PUB1	YNL016W	SMT3	Q12306	101 aa	Known RBP	3.11	□□□□□ -1.91
PUB1	YNL016W	TSC3	Q3E790	80 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	YPR014C	Q6B0W2	109 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	TDA8	Q6B2U8	126 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	YOR032W-A	Q8TGS1	66 aa		3.11	□□□□□ -1.91
PUB1	YNL016W	SLH1	P53327	1967 aa	Known RBP	3.1	□□□□□ -1.91
PUB1	YNL016W	HSP30	P25619	332 aa		3.1	□□□□□ -1.91
PUB1	YNL016W	UTP11	P34247	250 aa	Predicted RBP	3.1	□□□□□ -1.91
PUB1	YNL016W	PTH1	P38876	190 aa	Known RBP	3.1	□□□□□ -1.91
PUB1	YNL016W	AST2	P39945	430 aa	Known RBP	3.1	□□□□□ -1.91
PUB1	YNL016W	HPM1	P40481	377 aa		3.1	□□□□□ -1.91
PUB1	YNL016W	SYS1	P41544	203 aa		3.1	□□□□□ -1.91
PUB1	YNL016W	MIC19	P43594	170 aa		3.1	□□□□□ -1.91
PUB1	YNL016W	GPI14	P47088	403 aa	Known RBP	3.1	□□□□□ -1.91
PUB1	YNL016W	RPL21A	Q02753	160 aa	Known RBP	3.1	□□□□□ -1.91
PUB1	YNL016W	ARL3	Q02804	198 aa		3.1	□□□□□ -1.91
PUB1	YNL016W	COF1	Q03048	143 aa	Known RBP	3.1	□□□□□ -1.91
PUB1	YNL016W	GAS3	Q03655	524 aa		3.1	□□□□□ -1.91
PUB1	YNL016W	INP1	Q03694	420 aa		3.1	□□□□□ -1.91
PUB1	YNL016W	THI74	Q04083	370 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms