RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W YNL033WP53964 284 aa0.8□□□□□ -2.28
DDR48YMR173W YMR253CQ04835 414 aa0.8□□□□□ -2.28
DDR48YMR173W GRX8Q05926 109 aa0.8□□□□□ -2.28
DDR48YMR173W DAS2Q12084 232 aa0.8□□□□□ -2.28
DDR48YMR173W YCR023CP25351 611 aa0.79□□□□□ -2.28
DDR48YMR173W ARO7P32178 256 aa0.79□□□□□ -2.28
DDR48YMR173W GSP2P32836 220 aaKnown RBP0.79□□□□□ -2.28
DDR48YMR173W RPB7P34087 171 aa0.79□□□□□ -2.28
DDR48YMR173W YKL102CP34249 101 aa0.79□□□□□ -2.28
DDR48YMR173W CLG1P35190 452 aa0.79□□□□□ -2.28
DDR48YMR173W NVJ1P38881 321 aa0.79□□□□□ -2.28
DDR48YMR173W YEL067CP39978 195 aa0.79□□□□□ -2.28
DDR48YMR173W RFC2P40348 353 aa0.79□□□□□ -2.28
DDR48YMR173W YFH7P43591 353 aa0.79□□□□□ -2.28
DDR48YMR173W GPI14P47088 403 aaKnown RBP0.79□□□□□ -2.28
DDR48YMR173W RPL37AP49166 88 aaKnown RBP0.79□□□□□ -2.28
DDR48YMR173W SNO1Q03144 224 aa0.79□□□□□ -2.28
DDR48YMR173W YMR007WQ03675 126 aa0.79□□□□□ -2.28
DDR48YMR173W RNH202Q05635 350 aa0.79□□□□□ -2.28
DDR48YMR173W YLR050CQ12155 161 aaKnown RBP0.79□□□□□ -2.28
DDR48YMR173W ATP20Q12233 115 aa0.79□□□□□ -2.28
DDR48YMR173W DGK1Q12382 290 aa0.79□□□□□ -2.28
DDR48YMR173W COX8P04039 78 aa0.78□□□□□ -2.28
DDR48YMR173W GCY1P14065 312 aaKnown RBP RIP-Chip data0.78□□□□□ -2.28not detected
DDR48YMR173W NSP1P14907 823 aaKnown RBP0.78□□□□□ -2.28
DDR48YMR173W RAD51P25454 400 aa0.78□□□□□ -2.28
DDR48YMR173W YKR041WP36134 250 aa0.78□□□□□ -2.28
DDR48YMR173W PAM17P36147 197 aa0.78□□□□□ -2.28
DDR48YMR173W YHL018WP38744 120 aaPredicted RBP0.78□□□□□ -2.28
DDR48YMR173W GLR1P41921 483 aaKnown RBP0.78□□□□□ -2.28
DDR48YMR173W TTI2P47168 421 aa0.78□□□□□ -2.28
DDR48YMR173W TIM13P53299 105 aa0.78□□□□□ -2.28
DDR48YMR173W UPS3Q04006 179 aa0.78□□□□□ -2.28
DDR48YMR173W YMR252CQ04814 134 aa0.78□□□□□ -2.28
DDR48YMR173W YPR127WQ06494 345 aa0.78□□□□□ -2.28
DDR48YMR173W BRX1Q08235 291 aaKnown RBP0.78□□□□□ -2.28
DDR48YMR173W CMD1P06787 147 aaKnown RBP0.77□□□□□ -2.29
DDR48YMR173W APA2P22108 325 aa0.77□□□□□ -2.29
DDR48YMR173W HSP30P25619 332 aa0.77□□□□□ -2.29
DDR48YMR173W UBC8P28263 218 aa0.77□□□□□ -2.29
DDR48YMR173W YBL010CP32788 280 aa0.77□□□□□ -2.29
DDR48YMR173W RRT1P38192 103 aa0.77□□□□□ -2.29
DDR48YMR173W YNL200CP40165 246 aaKnown RBP0.77□□□□□ -2.29
DDR48YMR173W YLR460CP54007 376 aa0.77□□□□□ -2.29
DDR48YMR173W YHP1Q04116 353 aa0.77□□□□□ -2.29
DDR48YMR173W YOR214CQ12282 236 aa0.77□□□□□ -2.29
DDR48YMR173W YMR030W-AQ3E760 96 aa0.77□□□□□ -2.29
DDR48YMR173W SAC3P46674 1301 aa0.77□□□□□ -2.29
DDR48YMR173W ACC1Q00955 2233 aaKnown RBP0.77□□□□□ -2.29
DDR48YMR173W RPL35AP0CX84 120 aaKnown RBP0.76□□□□□ -2.29
DDR48YMR173W RPL35BP0CX85 120 aaKnown RBP0.76□□□□□ -2.29
DDR48YMR173W STP22P25604 385 aa0.76□□□□□ -2.29
DDR48YMR173W YBR242WP38331 238 aa0.76□□□□□ -2.29
DDR48YMR173W SRP14P38985 146 aa0.76□□□□□ -2.29
DDR48YMR173W PAC10P48363 199 aa0.76□□□□□ -2.29
DDR48YMR173W YNL140CP53910 189 aa0.76□□□□□ -2.29
DDR48YMR173W TMA20P89886 181 aaPredicted RBP0.76□□□□□ -2.29
DDR48YMR173W YKR005CQ02203 525 aa0.76□□□□□ -2.29
DDR48YMR173W VPS28Q02767 242 aa0.76□□□□□ -2.29
DDR48YMR173W PIR1Q03178 341 aa0.76□□□□□ -2.29
DDR48YMR173W DML1Q03652 475 aa0.76□□□□□ -2.29
DDR48YMR173W RRP17Q04031 235 aaPredicted RBP0.76□□□□□ -2.29
DDR48YMR173W GIM5Q04493 163 aa0.76□□□□□ -2.29
DDR48YMR173W YOR381W-AQ3E804 55 aa0.76□□□□□ -2.29
DDR48YMR173W RAD6P06104 172 aa0.75□□□□□ -2.29
DDR48YMR173W MRPL15P36523 253 aa0.75□□□□□ -2.29
DDR48YMR173W FES1P38260 290 aa0.75□□□□□ -2.29
DDR48YMR173W FYV4P38783 130 aaPredicted RBP0.75□□□□□ -2.29
DDR48YMR173W YEL073CP39974 107 aa0.75□□□□□ -2.29
DDR48YMR173W MPM1P40364 252 aa0.75□□□□□ -2.29
DDR48YMR173W NSE4P43124 402 aa0.75□□□□□ -2.29
DDR48YMR173W YGL235WP53071 178 aa0.75□□□□□ -2.29
DDR48YMR173W NQM1P53228 333 aaPredicted RBP0.75□□□□□ -2.29
DDR48YMR173W YIP3P53633 176 aa0.75□□□□□ -2.29
DDR48YMR173W DIG2Q03373 323 aaKnown RBP0.75□□□□□ -2.29
DDR48YMR173W YDR391CQ04170 232 aa0.75□□□□□ -2.29
DDR48YMR173W GAL83Q04739 417 aa0.75□□□□□ -2.29
DDR48YMR173W FIT2Q08906 153 aa0.75□□□□□ -2.29
DDR48YMR173W PEX11Q12462 236 aa0.75□□□□□ -2.29
DDR48YMR173W CMC2Q3E7A4 109 aa0.75□□□□□ -2.29
DDR48YMR173W FAS1P07149 2051 aaKnown RBP0.74□□□□□ -2.29
DDR48YMR173W YHR212W-AP0CX91 67 aa0.74□□□□□ -2.29
DDR48YMR173W STF2P16965 84 aa0.74□□□□□ -2.29
DDR48YMR173W AHT1P29589 182 aa0.74□□□□□ -2.29
DDR48YMR173W UBC6P33296 250 aaPredicted RBP0.74□□□□□ -2.29
DDR48YMR173W SRP102P36057 244 aaPredicted RBP0.74□□□□□ -2.29
DDR48YMR173W ETR1P38071 380 aa0.74□□□□□ -2.29
DDR48YMR173W CCS1P40202 249 aaKnown RBP0.74□□□□□ -2.29
DDR48YMR173W SBH1P52870 82 aa0.74□□□□□ -2.29
DDR48YMR173W SBH2P52871 88 aa0.74□□□□□ -2.29
DDR48YMR173W MET31Q03081 177 aa0.74□□□□□ -2.29
DDR48YMR173W YML079WQ03629 201 aa0.74□□□□□ -2.29
DDR48YMR173W UPS1Q05776 175 aa0.74□□□□□ -2.29
DDR48YMR173W YPR203WQ08994 102 aa0.74□□□□□ -2.29
DDR48YMR173W YLR053CQ12026 108 aa0.74□□□□□ -2.29
DDR48YMR173W ATG41Q12048 136 aa0.74□□□□□ -2.29
DDR48YMR173W COA3Q3E7B2 85 aa0.74□□□□□ -2.29
DDR48YMR173W SPS2P08459 502 aa0.73□□□□□ -2.29
DDR48YMR173W HUA1P40325 198 aa0.73□□□□□ -2.29
DDR48YMR173W MAK3Q03503 176 aa0.73□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms