RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD8YLR353W PAL1Q05518 499 aaKnown RBP3.71□□□□□ -1.82
BUD8YLR353W SYM1Q06563 197 aa3.71□□□□□ -1.82
BUD8YLR353W HEM25Q07534 307 aa3.71□□□□□ -1.82
BUD8YLR353W IRC19Q07843 230 aa3.71□□□□□ -1.82
BUD8YLR353W SDO1Q07953 250 aaKnown RBP3.71□□□□□ -1.82
BUD8YLR353W YOR343CQ12484 108 aa3.71□□□□□ -1.82
BUD8YLR353W RPL13AQ12690 199 aaPredicted RBP3.71□□□□□ -1.82
BUD8YLR353W TPI1P00942 248 aaKnown RBP3.7□□□□□ -1.82
BUD8YLR353W STE18P18852 110 aa3.7□□□□□ -1.82
BUD8YLR353W UMP1P38293 148 aa3.7□□□□□ -1.82
BUD8YLR353W OXA1P39952 402 aa3.7□□□□□ -1.82
BUD8YLR353W PGD1P40356 397 aa3.7□□□□□ -1.82
BUD8YLR353W AGE2P40529 298 aa3.7□□□□□ -1.82
BUD8YLR353W YIR035CP40579 254 aa3.7□□□□□ -1.82
BUD8YLR353W MRX5P47007 382 aa3.7□□□□□ -1.82
BUD8YLR353W BRR6P53062 197 aa3.7□□□□□ -1.82
BUD8YLR353W FMP41P53889 259 aaKnown RBP3.7□□□□□ -1.82
BUD8YLR353W YML018CQ03730 393 aa3.7□□□□□ -1.82
BUD8YLR353W YPD1Q07688 167 aa3.7□□□□□ -1.82
BUD8YLR353W MIM1Q08176 113 aa3.7□□□□□ -1.82
BUD8YLR353W SCP1Q08873 200 aa3.7□□□□□ -1.82
BUD8YLR353W FCF2Q12035 217 aaPredicted RBP3.7□□□□□ -1.82
BUD8YLR353W ADH2P00331 348 aaKnown RBP3.7□□□□□ -1.82
BUD8YLR353W STP22P25604 385 aa3.7□□□□□ -1.82
BUD8YLR353W PPA2P28239 310 aa3.7□□□□□ -1.82
BUD8YLR353W FRM2P37261 193 aa3.7□□□□□ -1.82
BUD8YLR353W POP8P38208 133 aa3.7□□□□□ -1.82
BUD8YLR353W PRS3P38689 320 aaKnown RBP3.7□□□□□ -1.82
BUD8YLR353W YIL086CP40503 102 aa3.7□□□□□ -1.82
BUD8YLR353W EMC5P40540 141 aa3.7□□□□□ -1.82
BUD8YLR353W MOG1P47123 218 aa3.7□□□□□ -1.82
BUD8YLR353W UFD1P53044 361 aa3.7□□□□□ -1.82
BUD8YLR353W MPA43P53583 542 aaPredicted RBP3.7□□□□□ -1.82
BUD8YLR353W AAH1P53909 347 aa3.7□□□□□ -1.82
BUD8YLR353W YCL001W-AP87012 153 aa3.7□□□□□ -1.82
BUD8YLR353W PET191Q02772 108 aa3.7□□□□□ -1.82
BUD8YLR353W YPL077CQ02831 240 aa3.7□□□□□ -1.82
BUD8YLR353W YDR248CQ03786 193 aa3.7□□□□□ -1.82
BUD8YLR353W YTH1Q06102 208 aaPredicted RBP3.7□□□□□ -1.82
BUD8YLR353W RPL31AP0C2H8 113 aaKnown RBP3.69□□□□□ -1.82
BUD8YLR353W EHD3P28817 500 aa3.69□□□□□ -1.82
BUD8YLR353W COS9P36034 407 aa3.69□□□□□ -1.82
BUD8YLR353W POP7P38291 140 aa3.69□□□□□ -1.82
BUD8YLR353W GTT1P40582 234 aa3.69□□□□□ -1.82
BUD8YLR353W APJ1P53940 528 aa3.69□□□□□ -1.82
BUD8YLR353W YPR147CQ06522 304 aaKnown RBP3.69□□□□□ -1.82
BUD8YLR353W MRX9Q07349 420 aaKnown RBP3.69□□□□□ -1.82
BUD8YLR353W YLR146W-AQ2V2P1 62 aa3.69□□□□□ -1.82
BUD8YLR353W QCR2P07257 368 aa3.68□□□□□ -1.82
BUD8YLR353W KTI12P34253 313 aaKnown RBP3.68□□□□□ -1.82
BUD8YLR353W MIG3P39943 394 aa3.68□□□□□ -1.82
BUD8YLR353W YFR054CP43622 192 aa3.68□□□□□ -1.82
BUD8YLR353W ALG9P53868 555 aaKnown RBP3.68□□□□□ -1.82
BUD8YLR353W EST3Q03096 181 aa3.68□□□□□ -1.82
BUD8YLR353W RRT7Q07829 113 aa3.68□□□□□ -1.82
BUD8YLR353W YCT1Q12235 531 aa3.68□□□□□ -1.82
BUD8YLR353W UTP23Q12339 254 aaKnown RBP3.68□□□□□ -1.82
BUD8YLR353W SGA1P08019 549 aa3.67□□□□□ -1.82
BUD8YLR353W MCH2P36032 473 aa3.67□□□□□ -1.82
BUD8YLR353W SWD3P38123 315 aa3.67□□□□□ -1.82
BUD8YLR353W PEX22P39718 180 aa3.67□□□□□ -1.82
BUD8YLR353W SPC25P40014 221 aa3.67□□□□□ -1.82
BUD8YLR353W ADO1P47143 340 aaKnown RBP3.67□□□□□ -1.82
BUD8YLR353W YGR026WP53217 278 aa3.67□□□□□ -1.82
BUD8YLR353W RNH201P53942 307 aa3.67□□□□□ -1.82
BUD8YLR353W DIA1P54005 336 aa3.67□□□□□ -1.82
BUD8YLR353W YDR209CQ03480 137 aa3.67□□□□□ -1.82
BUD8YLR353W FIT1Q04433 528 aa3.67□□□□□ -1.82
BUD8YLR353W LSO2Q3E772 92 aaKnown RBP3.67□□□□□ -1.82
BUD8YLR353W TDH3P00359 332 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
BUD8YLR353W SCO1P23833 295 aa3.67□□□□□ -1.82
BUD8YLR353W CDC50P25656 391 aa3.67□□□□□ -1.82
BUD8YLR353W HSP150P32478 413 aa3.67□□□□□ -1.82
BUD8YLR353W YBL010CP32788 280 aa3.67□□□□□ -1.82
BUD8YLR353W OM14P38325 134 aa3.67□□□□□ -1.82
BUD8YLR353W SUR2P38992 349 aa3.67□□□□□ -1.82
BUD8YLR353W SOL1P50278 321 aa3.67□□□□□ -1.82
BUD8YLR353W SLX9P53251 210 aaPredicted RBP3.67□□□□□ -1.82
BUD8YLR353W SEI1Q06058 285 aa3.67□□□□□ -1.82
BUD8YLR353W CTS2Q06350 511 aa3.67□□□□□ -1.82
BUD8YLR353W NIP7Q08962 181 aaKnown RBP3.67□□□□□ -1.82
BUD8YLR353W COX19Q3E731 98 aa3.67□□□□□ -1.82
BUD8YLR353W COX2P00410 251 aa3.66□□□□□ -1.82
BUD8YLR353W RPL35AP0CX84 120 aaKnown RBP3.66□□□□□ -1.82
BUD8YLR353W RPL35BP0CX85 120 aaKnown RBP3.66□□□□□ -1.82
BUD8YLR353W RPL16BP26785 198 aaKnown RBP3.66□□□□□ -1.82
BUD8YLR353W ATG8P38182 117 aaRIP-Chip data3.66□□□□□ -1.82not detected
BUD8YLR353W YEA6P39953 335 aa3.66□□□□□ -1.82
BUD8YLR353W RMD6P39975 231 aa3.66□□□□□ -1.82
BUD8YLR353W GNA1P43577 159 aaPredicted RBP3.66□□□□□ -1.82
BUD8YLR353W YAR1P46683 200 aa3.66□□□□□ -1.82
BUD8YLR353W YJR056CP47115 236 aa3.66□□□□□ -1.82
BUD8YLR353W UBC13P52490 153 aa3.66□□□□□ -1.82
BUD8YLR353W SNO1Q03144 224 aa3.66□□□□□ -1.82
BUD8YLR353W GEP5Q12393 293 aa3.66□□□□□ -1.82
BUD8YLR353W YAL064W-BO13512 126 aa3.65□□□□□ -1.82
BUD8YLR353W CDC7P06243 507 aa3.65□□□□□ -1.82
BUD8YLR353W YEA4P40004 342 aa3.65□□□□□ -1.82
BUD8YLR353W LSM8P47093 109 aaKnown RBP3.65□□□□□ -1.82
BUD8YLR353W DIG2Q03373 323 aaKnown RBP3.65□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms