RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	YBR292C	P38357	123 aa		12.34	□□□□□ -0.43
CCC1	YLR220W	SPC25	P40014	221 aa		12.34	□□□□□ -0.43
CCC1	YLR220W	YJR015W	P47090	510 aa		12.34	□□□□□ -0.43
CCC1	YLR220W	YGR219W	P53307	113 aa		12.34	□□□□□ -0.43
CCC1	YLR220W	DOG2	P38773	246 aa		12.33	□□□□□ -0.44
CCC1	YLR220W	DOG1	P38774	246 aa		12.33	□□□□□ -0.44
CCC1	YLR220W	YAR068W	P39564	161 aa		12.33	□□□□□ -0.44
CCC1	YLR220W	BDH1	P39714	382 aa		12.33	□□□□□ -0.44
CCC1	YLR220W	CAF16	P43569	289 aa		12.33	□□□□□ -0.44
CCC1	YLR220W	YGR018C	P53211	109 aa		12.33	□□□□□ -0.44
CCC1	YLR220W	POS5	Q06892	414 aa		12.33	□□□□□ -0.44
CCC1	YLR220W	ATP14	Q12349	124 aa		12.33	□□□□□ -0.44
CCC1	YLR220W	PIS1	P06197	220 aa	Known RBP	12.32	□□□□□ -0.44
CCC1	YLR220W	YNK1	P36010	153 aa	Known RBP	12.32	□□□□□ -0.44
CCC1	YLR220W	SHB17	P36136	271 aa	Known RBP	12.32	□□□□□ -0.44
CCC1	YLR220W	VPS55	P47111	140 aa		12.32	□□□□□ -0.44
CCC1	YLR220W	YHP1	Q04116	353 aa		12.32	□□□□□ -0.44
CCC1	YLR220W	ZRC1	P20107	442 aa		12.31	□□□□□ -0.44
CCC1	YLR220W	QCR9	P22289	66 aa		12.31	□□□□□ -0.44
CCC1	YLR220W	YCR022C	P25620	114 aa		12.31	□□□□□ -0.44
CCC1	YLR220W	YPS1	P32329	569 aa		12.31	□□□□□ -0.44
CCC1	YLR220W	YKL075C	P36083	450 aa		12.31	□□□□□ -0.44
CCC1	YLR220W	PRY2	P36110	329 aa		12.31	□□□□□ -0.44
CCC1	YLR220W	ARR3	Q06598	404 aa		12.31	□□□□□ -0.44
CCC1	YLR220W	PAA1	Q12447	191 aa	Known RBP	12.31	□□□□□ -0.44
CCC1	YLR220W	DYN1	P36022	4092 aa		12.31	□□□□□ -0.44
CCC1	YLR220W	CDC50	P25656	391 aa		12.3	□□□□□ -0.44
CCC1	YLR220W	YBL059W	P34224	193 aa		12.3	□□□□□ -0.44
CCC1	YLR220W	MIC27	P50945	234 aa		12.3	□□□□□ -0.44
CCC1	YLR220W	ADD37	Q03233	198 aa		12.3	□□□□□ -0.44
CCC1	YLR220W	IRC23	Q08416	157 aa		12.3	□□□□□ -0.44
CCC1	YLR220W	YOR352W	Q08816	343 aa		12.3	□□□□□ -0.44
CCC1	YLR220W	COX19	Q3E731	98 aa		12.3	□□□□□ -0.44
CCC1	YLR220W	CDS1	P38221	457 aa		12.29	□□□□□ -0.44
CCC1	YLR220W	SHG1	P38337	142 aa		12.29	□□□□□ -0.44
CCC1	YLR220W	ODC1	Q03028	310 aa		12.29	□□□□□ -0.44
CCC1	YLR220W	HOR7	Q05827	59 aa		12.29	□□□□□ -0.44
CCC1	YLR220W	FLO5	P38894	1075 aa		12.28	□□□□□ -0.44
CCC1	YLR220W	RXT3	Q07458	294 aa		12.28	□□□□□ -0.44
CCC1	YLR220W	YOR015W	Q12169	119 aa		12.28	□□□□□ -0.44
CCC1	YLR220W	SPO13	P23624	291 aa		12.27	□□□□□ -0.45
CCC1	YLR220W	ELO2	P25358	347 aa		12.27	□□□□□ -0.45
CCC1	YLR220W	AVT5	P38176	459 aa		12.27	□□□□□ -0.45
CCC1	YLR220W	FIP1	P45976	327 aa		12.27	□□□□□ -0.45
CCC1	YLR220W	RIB4	P50861	169 aa	Predicted RBP	12.27	□□□□□ -0.45
CCC1	YLR220W	LST7	P53237	242 aa		12.27	□□□□□ -0.45
CCC1	YLR220W	SWT21	P53873	357 aa	Predicted RBP	12.27	□□□□□ -0.45
CCC1	YLR220W	FMP41	P53889	259 aa	Known RBP	12.27	□□□□□ -0.45
CCC1	YLR220W	SHH3	Q04487	196 aa		12.27	□□□□□ -0.45
CCC1	YLR220W	AVO2	Q04749	426 aa		12.27	□□□□□ -0.45
CCC1	YLR220W	YER190C-B	P0CX94	160 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	YEL077W-A	P0CX95	160 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	YGR296C-B	P0CX96	160 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	YPL283W-B	P0CX97	160 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	YPR204C-A	P0CX98	160 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	YFL068W	P0CX99	160 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	YLL066W-A	P0CY00	160 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	YLL067W-A	P0CY01	160 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	YKL102C	P34249	101 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	RRT1	P38192	103 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	MIC12	P38341	106 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	SAS2	P40963	338 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	CAF40	P53829	373 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	TMA23	Q03525	211 aa		12.26	□□□□□ -0.45
CCC1	YLR220W	MRPL23	Q12487	163 aa	Predicted RBP	12.26	□□□□□ -0.45
CCC1	YLR220W	YMR316C-A	I2HB70	103 aa		12.25	□□□□□ -0.45
CCC1	YLR220W	SMD3	P43321	101 aa	Known RBP	12.25	□□□□□ -0.45
CCC1	YLR220W	CTR3	Q06686	241 aa		12.25	□□□□□ -0.45
CCC1	YLR220W	SDO1	Q07953	250 aa	Known RBP	12.25	□□□□□ -0.45
CCC1	YLR220W	ACP1	P32463	125 aa		12.24	□□□□□ -0.45
CCC1	YLR220W	YNL194C	P40169	301 aa		12.24	□□□□□ -0.45
CCC1	YLR220W	SNN1	P48232	102 aa		12.24	□□□□□ -0.45
CCC1	YLR220W	YMR007W	Q03675	126 aa		12.24	□□□□□ -0.45
CCC1	YLR220W	LAS17	Q12446	633 aa		12.24	□□□□□ -0.45
CCC1	YLR220W	PET494	P07390	489 aa	Predicted RBP	12.23	□□□□□ -0.45
CCC1	YLR220W	MSK1	P32048	576 aa		12.23	□□□□□ -0.45
CCC1	YLR220W	CPD1	P53314	239 aa		12.23	□□□□□ -0.45
CCC1	YLR220W	CYC3	P06182	269 aa		12.22	□□□□□ -0.45
CCC1	YLR220W	POP5	P28005	173 aa		12.22	□□□□□ -0.45
CCC1	YLR220W	DER1	P38307	211 aa		12.22	□□□□□ -0.45
CCC1	YLR220W	ALK2	P32789	676 aa	Predicted RBP	12.21	□□□□□ -0.45
CCC1	YLR220W	PTC7	P38797	343 aa		12.21	□□□□□ -0.45
CCC1	YLR220W	YDL186W	P48568	277 aa		12.21	□□□□□ -0.45
CCC1	YLR220W	CAB4	P53332	305 aa		12.21	□□□□□ -0.45
CCC1	YLR220W	SDH7	Q04401	133 aa		12.21	□□□□□ -0.45
CCC1	YLR220W	CDC7	P06243	507 aa		12.2	□□□□□ -0.46
CCC1	YLR220W	SIT1	P39980	628 aa		12.2	□□□□□ -0.46
CCC1	YLR220W	TOS8	P53147	276 aa		12.2	□□□□□ -0.46
CCC1	YLR220W	YJL027C	P47063	138 aa	Predicted RBP	12.19	□□□□□ -0.46
CCC1	YLR220W	ORM2	Q06144	216 aa		12.19	□□□□□ -0.46
CCC1	YLR220W	TIM18	Q08749	192 aa		12.19	□□□□□ -0.46
CCC1	YLR220W	YGR035W-A	Q45U48	73 aa		12.19	□□□□□ -0.46
CCC1	YLR220W	YHR213W	P0CI67	198 aa		12.18	□□□□□ -0.46
CCC1	YLR220W	HST4	P53688	370 aa		12.18	□□□□□ -0.46
CCC1	YLR220W	ATC1	Q04005	294 aa		12.18	□□□□□ -0.46
CCC1	YLR220W	PRM3	Q08931	133 aa		12.18	□□□□□ -0.46
CCC1	YLR220W	PET100	P38958	111 aa		12.17	□□□□□ -0.46
CCC1	YLR220W	ATG27	P46989	271 aa		12.17	□□□□□ -0.46
CCC1	YLR220W	GNP1	P48813	663 aa		12.17	□□□□□ -0.46
CCC1	YLR220W	VMA9	Q3E7B6	73 aa		12.17	□□□□□ -0.46

Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms