RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W FAS1P07149 2051 aaKnown RBP5.46□□□□□ -1.54
GEF1YJR040W PAI3P01094 68 aa5.46□□□□□ -1.54
GEF1YJR040W URA5P13298 226 aaKnown RBP5.46□□□□□ -1.54
GEF1YJR040W MAK32P23060 363 aa5.46□□□□□ -1.54
GEF1YJR040W SPO13P23624 291 aa5.46□□□□□ -1.54
GEF1YJR040W MNS1P32906 549 aa5.46□□□□□ -1.54
GEF1YJR040W MTR2P34232 184 aaKnown RBP5.46□□□□□ -1.54
GEF1YJR040W SMD3P43321 101 aaKnown RBP5.46□□□□□ -1.54
GEF1YJR040W YNL165WP53891 406 aa5.46□□□□□ -1.54
GEF1YJR040W YDR209CQ03480 137 aa5.46□□□□□ -1.54
GEF1YJR040W YDR391CQ04170 232 aa5.46□□□□□ -1.54
GEF1YJR040W ANB1P19211 157 aa5.46□□□□□ -1.54
GEF1YJR040W YCR025CP25352 136 aa5.46□□□□□ -1.54
GEF1YJR040W FEN2P25621 512 aaKnown RBP5.46□□□□□ -1.54
GEF1YJR040W QDR3P38227 689 aa5.46□□□□□ -1.54
GEF1YJR040W PAC2P39937 518 aa5.46□□□□□ -1.54
GEF1YJR040W HSV2P50079 448 aaPredicted RBP5.46□□□□□ -1.54
GEF1YJR040W DAD3P69850 94 aa5.46□□□□□ -1.54
GEF1YJR040W IZH1Q03419 316 aa5.46□□□□□ -1.54
GEF1YJR040W DAL4Q04895 635 aa5.46□□□□□ -1.54
GEF1YJR040W ARR3Q06598 404 aa5.46□□□□□ -1.54
GEF1YJR040W NIP7Q08962 181 aaKnown RBP5.46□□□□□ -1.54
GEF1YJR040W ISA2Q12425 185 aa5.46□□□□□ -1.54
GEF1YJR040W AFG1P32317 509 aa5.45□□□□□ -1.54
GEF1YJR040W ECO1P43605 281 aa5.45□□□□□ -1.54
GEF1YJR040W MSY1P48527 492 aa5.45□□□□□ -1.54
GEF1YJR040W TSA2Q04120 196 aa5.45□□□□□ -1.54
GEF1YJR040W LOA1Q06508 300 aa5.45□□□□□ -1.54
GEF1YJR040W YRA1Q12159 226 aaKnown RBP5.45□□□□□ -1.54
GEF1YJR040W RPB10P22139 70 aa5.45□□□□□ -1.54
GEF1YJR040W DUG3P53871 357 aa5.45□□□□□ -1.54
GEF1YJR040W YPL080CQ02826 108 aa5.45□□□□□ -1.54
GEF1YJR040W POS5Q06892 414 aa5.45□□□□□ -1.54
GEF1YJR040W REC114P32841 428 aa5.44□□□□□ -1.54
GEF1YJR040W RPB11P38902 120 aa5.44□□□□□ -1.54
GEF1YJR040W PRE5P40302 234 aaKnown RBP5.44□□□□□ -1.54
GEF1YJR040W YMR166CQ03829 368 aa5.44□□□□□ -1.54
GEF1YJR040W MCH4Q08268 501 aa5.44□□□□□ -1.54
GEF1YJR040W RDL2Q08742 149 aaKnown RBP5.44□□□□□ -1.54
GEF1YJR040W SCS22Q6Q595 175 aa5.44□□□□□ -1.54
GEF1YJR040W FMP49A0A023PZB3 126 aa5.43□□□□□ -1.54
GEF1YJR040W RPI1P23250 407 aaKnown RBP5.43□□□□□ -1.54
GEF1YJR040W SWD2P36104 329 aaPredicted RBP5.43□□□□□ -1.54
GEF1YJR040W SNU13P39990 126 aaKnown RBP5.43□□□□□ -1.54
GEF1YJR040W REE1P40893 198 aa5.43□□□□□ -1.54
GEF1YJR040W RPL21AQ02753 160 aaKnown RBP5.43□□□□□ -1.54
GEF1YJR040W YPR071WQ12346 211 aa5.43□□□□□ -1.54
GEF1YJR040W RPL21BQ12672 160 aaKnown RBP5.43□□□□□ -1.54
GEF1YJR040W YAL064W-BO13512 126 aa5.43□□□□□ -1.54
GEF1YJR040W AHT1P29589 182 aa5.43□□□□□ -1.54
GEF1YJR040W ERG2P32352 222 aa5.43□□□□□ -1.54
GEF1YJR040W SUR7P54003 302 aa5.43□□□□□ -1.54
GEF1YJR040W YMR090WQ04304 227 aaKnown RBP5.43□□□□□ -1.54
GEF1YJR040W NAT3Q06504 195 aa5.43□□□□□ -1.54
GEF1YJR040W MOH1P38191 138 aa5.42□□□□□ -1.54
GEF1YJR040W TEM1P38987 245 aa5.42□□□□□ -1.54
GEF1YJR040W YND1P40009 630 aa5.42□□□□□ -1.54
GEF1YJR040W YNL198CP40166 100 aa5.42□□□□□ -1.54
GEF1YJR040W MSO1P53604 210 aaKnown RBP5.42□□□□□ -1.54
GEF1YJR040W SDC1Q03323 175 aa5.42□□□□□ -1.54
GEF1YJR040W GIS1Q03833 894 aa5.42□□□□□ -1.54
GEF1YJR040W SCW10Q04951 389 aa5.42□□□□□ -1.54
GEF1YJR040W YPL162CQ12042 273 aa5.42□□□□□ -1.54
GEF1YJR040W TGS1Q12052 315 aa5.42□□□□□ -1.54
GEF1YJR040W IRA2P19158 3079 aa5.42□□□□□ -1.54
GEF1YJR040W YOR304C-AO14468 76 aa5.42□□□□□ -1.54
GEF1YJR040W TIR1P10863 254 aa5.42□□□□□ -1.54
GEF1YJR040W SHB17P36136 271 aaKnown RBP5.42□□□□□ -1.54
GEF1YJR040W MID1P41821 548 aa5.42□□□□□ -1.54
GEF1YJR040W PDR17P53844 350 aa5.42□□□□□ -1.54
GEF1YJR040W MIX14Q04341 121 aa5.42□□□□□ -1.54
GEF1YJR040W TRI1Q05024 226 aa5.42□□□□□ -1.54
GEF1YJR040W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
GEF1YJR040W CDC36P06100 191 aaPredicted RBP5.41□□□□□ -1.54
GEF1YJR040W YFL068WP0CX99 160 aa5.41□□□□□ -1.54
GEF1YJR040W YLL066W-AP0CY00 160 aa5.41□□□□□ -1.54
GEF1YJR040W YLL067W-AP0CY01 160 aa5.41□□□□□ -1.54
GEF1YJR040W SEC11P15367 167 aa5.41□□□□□ -1.54
GEF1YJR040W SPS18P32572 300 aa5.41□□□□□ -1.54
GEF1YJR040W CTK2P46962 323 aa5.41□□□□□ -1.54
GEF1YJR040W YDL183CP48569 320 aa5.41□□□□□ -1.54
GEF1YJR040W YGL230CP53074 147 aa5.41□□□□□ -1.54
GEF1YJR040W ATG4P53867 494 aa5.41□□□□□ -1.54
GEF1YJR040W YHR214C-EQ8TGK0 99 aa5.41□□□□□ -1.54
GEF1YJR040W RPL7AP05737 244 aaKnown RBP5.41□□□□□ -1.54
GEF1YJR040W OCH1P31755 480 aa5.41□□□□□ -1.54
GEF1YJR040W MRP49P32388 137 aa5.41□□□□□ -1.54
GEF1YJR040W YIL169CP40442 995 aa5.41□□□□□ -1.54
GEF1YJR040W XBP1P40489 647 aa5.41□□□□□ -1.54
GEF1YJR040W HAC1P41546 238 aa5.41□□□□□ -1.54
GEF1YJR040W ERG25P53045 309 aa5.41□□□□□ -1.54
GEF1YJR040W YPL077CQ02831 240 aa5.41□□□□□ -1.54
GEF1YJR040W RPL7BQ12213 244 aaKnown RBP5.41□□□□□ -1.54
GEF1YJR040W YCR024C-BQ3E7Z8 88 aa5.41□□□□□ -1.54
GEF1YJR040W YCR007CP25354 239 aa5.4□□□□□ -1.54
GEF1YJR040W SHO1P40073 367 aa5.4□□□□□ -1.54
GEF1YJR040W PRM5P40476 318 aa5.4□□□□□ -1.54
GEF1YJR040W MRPL19P53875 158 aa5.4□□□□□ -1.54
GEF1YJR040W ISU2Q12056 156 aa5.4□□□□□ -1.54
GEF1YJR040W YCR075W-AQ3E830 75 aa5.4□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 90.8 ms