RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C ACP1P32463 125 aa7.78□□□□□ -1.16
MET28YIR017C SIP1P32578 815 aa7.78□□□□□ -1.16
MET28YIR017C CDS1P38221 457 aa7.78□□□□□ -1.16
MET28YIR017C QDR3P38227 689 aa7.78□□□□□ -1.16
MET28YIR017C DOG2P38773 246 aa7.78□□□□□ -1.16
MET28YIR017C DOG1P38774 246 aa7.78□□□□□ -1.16
MET28YIR017C WWM1P43582 211 aaKnown RBP7.78□□□□□ -1.16
MET28YIR017C ARR3Q06598 404 aa7.78□□□□□ -1.16
MET28YIR017C POS5Q06892 414 aa7.78□□□□□ -1.16
MET28YIR017C PBP4Q07362 185 aaKnown RBP7.78□□□□□ -1.16
MET28YIR017C QCR9P22289 66 aa7.77□□□□□ -1.17
MET28YIR017C SPO13P23624 291 aa7.77□□□□□ -1.17
MET28YIR017C VPS55P47111 140 aa7.77□□□□□ -1.17
MET28YIR017C MIC27P50945 234 aa7.77□□□□□ -1.17
MET28YIR017C BOR1P53838 576 aa7.77□□□□□ -1.17
MET28YIR017C ADD37Q03233 198 aa7.77□□□□□ -1.17
MET28YIR017C YHP1Q04116 353 aa7.77□□□□□ -1.17
MET28YIR017C POM34Q12445 299 aa7.77□□□□□ -1.17
MET28YIR017C PIS1P06197 220 aaKnown RBP7.76□□□□□ -1.17
MET28YIR017C ELO2P25358 347 aa7.76□□□□□ -1.17
MET28YIR017C CDC50P25656 391 aa7.76□□□□□ -1.17
MET28YIR017C YPS1P32329 569 aa7.76□□□□□ -1.17
MET28YIR017C SHB17P36136 271 aaKnown RBP7.76□□□□□ -1.17
MET28YIR017C AVT5P38176 459 aa7.76□□□□□ -1.17
MET28YIR017C RRT1P38192 103 aa7.76□□□□□ -1.17
MET28YIR017C PTC7P38797 343 aa7.76□□□□□ -1.17
MET28YIR017C YAR068WP39564 161 aa7.76□□□□□ -1.17
MET28YIR017C SPC25P40014 221 aa7.76□□□□□ -1.17
MET28YIR017C CAF16P43569 289 aa7.76□□□□□ -1.17
MET28YIR017C CAF40P53829 373 aa7.76□□□□□ -1.17
MET28YIR017C HOR7Q05827 59 aa7.76□□□□□ -1.17
MET28YIR017C YOR015WQ12169 119 aa7.76□□□□□ -1.17
MET28YIR017C PRY2P36110 329 aa7.75□□□□□ -1.17
MET28YIR017C CSH1P38287 376 aa7.75□□□□□ -1.17
MET28YIR017C BDH1P39714 382 aa7.75□□□□□ -1.17
MET28YIR017C TAX4P47030 604 aa7.75□□□□□ -1.17
MET28YIR017C LST7P53237 242 aa7.75□□□□□ -1.17
MET28YIR017C SHH3Q04487 196 aa7.75□□□□□ -1.17
MET28YIR017C DFR1P07807 211 aaKnown RBP RIP-Chip data7.74□□□□□ -1.17not detected
MET28YIR017C AHT1P29589 182 aa7.74□□□□□ -1.17
MET28YIR017C YBL059WP34224 193 aa7.74□□□□□ -1.17
MET28YIR017C YNK1P36010 153 aaKnown RBP7.74□□□□□ -1.17
MET28YIR017C RIB4P50861 169 aaPredicted RBP7.74□□□□□ -1.17
MET28YIR017C CPD1P53314 239 aa7.74□□□□□ -1.17
MET28YIR017C SWT21P53873 357 aaPredicted RBP7.74□□□□□ -1.17
MET28YIR017C ODC1Q03028 310 aa7.74□□□□□ -1.17
MET28YIR017C TMA23Q03525 211 aa7.74□□□□□ -1.17
MET28YIR017C SDH7Q04401 133 aa7.74□□□□□ -1.17
MET28YIR017C CTR3Q06686 241 aa7.74□□□□□ -1.17
MET28YIR017C RXT3Q07458 294 aa7.74□□□□□ -1.17
MET28YIR017C IRC23Q08416 157 aa7.74□□□□□ -1.17
MET28YIR017C UTP20P35194 2493 aaKnown RBP7.73□□□□□ -1.17
MET28YIR017C YMR316C-AI2HB70 103 aa7.73□□□□□ -1.17
MET28YIR017C MSK1P32048 576 aa7.73□□□□□ -1.17
MET28YIR017C ECM25P32525 599 aa7.73□□□□□ -1.17
MET28YIR017C YKL102CP34249 101 aa7.73□□□□□ -1.17
MET28YIR017C SAS2P40963 338 aa7.73□□□□□ -1.17
MET28YIR017C SMD3P43321 101 aaKnown RBP7.73□□□□□ -1.17
MET28YIR017C SNN1P48232 102 aa7.73□□□□□ -1.17
MET28YIR017C TOS8P53147 276 aa7.73□□□□□ -1.17
MET28YIR017C FMP41P53889 259 aaKnown RBP7.73□□□□□ -1.17
MET28YIR017C YMR007WQ03675 126 aa7.73□□□□□ -1.17
MET28YIR017C YOR352WQ08816 343 aa7.73□□□□□ -1.17
MET28YIR017C ATP14Q12349 124 aa7.73□□□□□ -1.17
MET28YIR017C COX19Q3E731 98 aa7.73□□□□□ -1.17
MET28YIR017C YER190C-BP0CX94 160 aa7.72□□□□□ -1.17
MET28YIR017C YEL077W-AP0CX95 160 aa7.72□□□□□ -1.17
MET28YIR017C YGR296C-BP0CX96 160 aa7.72□□□□□ -1.17
MET28YIR017C YPL283W-BP0CX97 160 aa7.72□□□□□ -1.17
MET28YIR017C YPR204C-AP0CX98 160 aa7.72□□□□□ -1.17
MET28YIR017C YFL068WP0CX99 160 aa7.72□□□□□ -1.17
MET28YIR017C YLL066W-AP0CY00 160 aa7.72□□□□□ -1.17
MET28YIR017C YLL067W-AP0CY01 160 aa7.72□□□□□ -1.17
MET28YIR017C YCR022CP25620 114 aa7.72□□□□□ -1.17
MET28YIR017C DER1P38307 211 aa7.72□□□□□ -1.17
MET28YIR017C FLO5P38894 1075 aa7.72□□□□□ -1.17
MET28YIR017C YGR018CP53211 109 aa7.72□□□□□ -1.17
MET28YIR017C YGR219WP53307 113 aa7.72□□□□□ -1.17
MET28YIR017C CAB4P53332 305 aa7.72□□□□□ -1.17
MET28YIR017C YML122CQ03207 126 aa7.72□□□□□ -1.17
MET28YIR017C YGR035W-AQ45U48 73 aa7.72□□□□□ -1.17
MET28YIR017C PET494P07390 489 aaPredicted RBP7.71□□□□□ -1.18
MET28YIR017C RIB5P38145 238 aa7.71□□□□□ -1.18
MET28YIR017C ATC1Q04005 294 aa7.71□□□□□ -1.18
MET28YIR017C PRM3Q08931 133 aa7.71□□□□□ -1.18
MET28YIR017C MRPL23Q12487 163 aaPredicted RBP7.71□□□□□ -1.18
MET28YIR017C CDC7P06243 507 aa7.7□□□□□ -1.18
MET28YIR017C AVO2Q04749 426 aa7.7□□□□□ -1.18
MET28YIR017C SME1Q12330 94 aaPredicted RBP7.7□□□□□ -1.18
MET28YIR017C SRB6P32570 121 aa7.69□□□□□ -1.18
MET28YIR017C ALK2P32789 676 aaPredicted RBP7.69□□□□□ -1.18
MET28YIR017C MIC12P38341 106 aa7.69□□□□□ -1.18
MET28YIR017C YNL194CP40169 301 aa7.69□□□□□ -1.18
MET28YIR017C ATG27P46989 271 aa7.69□□□□□ -1.18
MET28YIR017C ERV25P54837 211 aaKnown RBP7.69□□□□□ -1.18
MET28YIR017C SDO1Q07953 250 aaKnown RBP7.69□□□□□ -1.18
MET28YIR017C CYC3P06182 269 aa7.68□□□□□ -1.18
MET28YIR017C SIT1P39980 628 aa7.68□□□□□ -1.18
MET28YIR017C RTS2P40962 232 aa7.68□□□□□ -1.18
MET28YIR017C MCM22P47167 239 aa7.68□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms