RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W ADH5P38113 351 aaKnown RBP9.26□□□□□ -0.93
SIM1YIL123W YBR184WP38299 523 aa9.26□□□□□ -0.93
SIM1YIL123W RTS2P40962 232 aa9.26□□□□□ -0.93
SIM1YIL123W DAN1P47178 298 aa9.26□□□□□ -0.93
SIM1YIL123W CRH1P53301 507 aa9.26□□□□□ -0.93
SIM1YIL123W WTM2Q12206 467 aa9.26□□□□□ -0.93
SIM1YIL123W YCL048W-AQ2V2Q2 79 aa9.26□□□□□ -0.93
SIM1YIL123W NOP1P15646 327 aaKnown RBP9.25□□□□□ -0.93
SIM1YIL123W IES6P32617 166 aa9.25□□□□□ -0.93
SIM1YIL123W ALK2P32789 676 aaPredicted RBP9.25□□□□□ -0.93
SIM1YIL123W MRPS9P38120 278 aa9.25□□□□□ -0.93
SIM1YIL123W GPI18P38211 433 aa9.25□□□□□ -0.93
SIM1YIL123W QDR3P38227 689 aa9.25□□□□□ -0.93
SIM1YIL123W TRS20P38334 175 aa9.25□□□□□ -0.93
SIM1YIL123W NSE4P43124 402 aa9.25□□□□□ -0.93
SIM1YIL123W SBH2P52871 88 aa9.25□□□□□ -0.93
SIM1YIL123W YMR007WQ03675 126 aa9.25□□□□□ -0.93
SIM1YIL123W YLR118CQ12354 227 aa9.25□□□□□ -0.93
SIM1YIL123W MRS3P10566 314 aa9.24□□□□□ -0.93
SIM1YIL123W POP5P28005 173 aa9.24□□□□□ -0.93
SIM1YIL123W FPR2P32472 135 aa9.24□□□□□ -0.93
SIM1YIL123W SDH4P37298 181 aa9.24□□□□□ -0.93
SIM1YIL123W PAU15P40585 124 aa9.24□□□□□ -0.93
SIM1YIL123W YJR015WP47090 510 aa9.24□□□□□ -0.93
SIM1YIL123W YGL114WP53134 725 aa9.24□□□□□ -0.93
SIM1YIL123W YGR026WP53217 278 aa9.24□□□□□ -0.93
SIM1YIL123W ARR2Q06597 130 aa9.24□□□□□ -0.93
SIM1YIL123W CTR3Q06686 241 aa9.24□□□□□ -0.93
SIM1YIL123W POM34Q12445 299 aa9.24□□□□□ -0.93
SIM1YIL123W TOM40P23644 387 aaKnown RBP9.23□□□□□ -0.93
SIM1YIL123W PMU1P36069 295 aa9.23□□□□□ -0.93
SIM1YIL123W ALG14P38242 237 aa9.23□□□□□ -0.93
SIM1YIL123W MIC27P50945 234 aa9.23□□□□□ -0.93
SIM1YIL123W HTB1P02293 131 aaKnown RBP9.22□□□□□ -0.93
SIM1YIL123W LOC1P43586 204 aaPredicted RBP9.22□□□□□ -0.93
SIM1YIL123W MIX17Q03667 156 aa9.22□□□□□ -0.93
SIM1YIL123W MEC1P38111 2368 aa9.22□□□□□ -0.93
SIM1YIL123W RPB3P16370 318 aaKnown RBP9.22□□□□□ -0.93
SIM1YIL123W DER1P38307 211 aa9.22□□□□□ -0.93
SIM1YIL123W GAT2P40209 560 aa9.22□□□□□ -0.93
SIM1YIL123W MGA1P53050 456 aa9.22□□□□□ -0.93
SIM1YIL123W SHH3Q04487 196 aa9.22□□□□□ -0.93
SIM1YIL123W IRC25Q07951 179 aa9.22□□□□□ -0.93
SIM1YIL123W TRA1P38811 3744 aa9.21□□□□□ -0.93
SIM1YIL123W TAX4P47030 604 aa9.21□□□□□ -0.94
SIM1YIL123W YNL092WP53934 400 aa9.21□□□□□ -0.94
SIM1YIL123W STD1Q02794 444 aa9.21□□□□□ -0.94
SIM1YIL123W YPR071WQ12346 211 aa9.21□□□□□ -0.94
SIM1YIL123W HEM13P11353 328 aaKnown RBP9.2□□□□□ -0.94
SIM1YIL123W POF1P25576 258 aa9.2□□□□□ -0.94
SIM1YIL123W YAR068WP39564 161 aa9.2□□□□□ -0.94
SIM1YIL123W ATC1Q04005 294 aa9.2□□□□□ -0.94
SIM1YIL123W COQ3P27680 312 aa9.19□□□□□ -0.94
SIM1YIL123W AFR1P33304 620 aa9.19□□□□□ -0.94
SIM1YIL123W YPT31P38555 223 aaKnown RBP9.19□□□□□ -0.94
SIM1YIL123W SAS2P40963 338 aa9.19□□□□□ -0.94
SIM1YIL123W POS5Q06892 414 aa9.19□□□□□ -0.94
SIM1YIL123W RAD28Q12021 506 aa9.19□□□□□ -0.94
SIM1YIL123W SNU23Q12368 194 aaPredicted RBP9.19□□□□□ -0.94
SIM1YIL123W PET494P07390 489 aaPredicted RBP9.18□□□□□ -0.94
SIM1YIL123W RPS22AP0C0W1 130 aaKnown RBP9.18□□□□□ -0.94
SIM1YIL123W BGL2P15703 313 aaKnown RBP9.18□□□□□ -0.94
SIM1YIL123W PTC7P38797 343 aa9.18□□□□□ -0.94
SIM1YIL123W NCA3P46955 337 aa9.18□□□□□ -0.94
SIM1YIL123W SUT1P53032 299 aaKnown RBP9.18□□□□□ -0.94
SIM1YIL123W YGR045CP53229 120 aa9.18□□□□□ -0.94
SIM1YIL123W YHP1Q04116 353 aa9.18□□□□□ -0.94
SIM1YIL123W ADH6Q04894 360 aaKnown RBP9.18□□□□□ -0.94
SIM1YIL123W YMR316C-AI2HB70 103 aa9.17□□□□□ -0.94
SIM1YIL123W PIS1P06197 220 aaKnown RBP9.17□□□□□ -0.94
SIM1YIL123W CDC7P06243 507 aa9.17□□□□□ -0.94
SIM1YIL123W HSP10P38910 106 aa9.17□□□□□ -0.94
SIM1YIL123W NOP16P40007 231 aaKnown RBP9.17□□□□□ -0.94
SIM1YIL123W LST8P41318 303 aa9.17□□□□□ -0.94
SIM1YIL123W TIM10P87108 93 aa9.17□□□□□ -0.94
SIM1YIL123W TMC1Q08422 150 aaPredicted RBP9.17□□□□□ -0.94
SIM1YIL123W SOD1P00445 154 aaKnown RBP9.16□□□□□ -0.94
SIM1YIL123W ADE8P04161 214 aa9.16□□□□□ -0.94
SIM1YIL123W YBR013CP38215 129 aa9.16□□□□□ -0.94
SIM1YIL123W YHL044WP38727 235 aa9.16□□□□□ -0.94
SIM1YIL123W PUS4P48567 403 aaKnown RBP9.16□□□□□ -0.94
SIM1YIL123W YIP1P53039 248 aa9.16□□□□□ -0.94
SIM1YIL123W ATO3Q12359 275 aa9.16□□□□□ -0.94
SIM1YIL123W YBL029C-AQ3E756 94 aa9.16□□□□□ -0.94
SIM1YIL123W NHP6AP11632 93 aaKnown RBP9.15□□□□□ -0.94
SIM1YIL123W RPS0AP32905 252 aaKnown RBP9.15□□□□□ -0.94
SIM1YIL123W MIA40P36046 403 aa9.15□□□□□ -0.94
SIM1YIL123W YKR045CP36138 183 aa9.15□□□□□ -0.94
SIM1YIL123W CSH1P38287 376 aa9.15□□□□□ -0.94
SIM1YIL123W YIR020CP40575 100 aa9.15□□□□□ -0.94
SIM1YIL123W DSK2P48510 373 aa9.15□□□□□ -0.94
SIM1YIL123W LOA1Q06508 300 aa9.15□□□□□ -0.94
SIM1YIL123W YOP1Q12402 180 aa9.15□□□□□ -0.94
SIM1YIL123W RNA15P25299 296 aaPredicted RBP9.14□□□□□ -0.95
SIM1YIL123W YBL071CP38185 102 aa9.14□□□□□ -0.95
SIM1YIL123W BDH1P39714 382 aa9.14□□□□□ -0.95
SIM1YIL123W CYB5P40312 120 aa9.14□□□□□ -0.95
SIM1YIL123W YNL234WP53857 426 aa9.14□□□□□ -0.95
SIM1YIL123W SPO24Q3E752 67 aa9.14□□□□□ -0.95
SIM1YIL123W HMX1P32339 317 aa9.14□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 339 ms