RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	ADH3	P07246	375 aa	Known RBP	2.61	□□□□□ -1.99
CCM1	YGR150C	YER039C-A	P0CD97	72 aa		2.61	□□□□□ -1.99
CCM1	YGR150C	RPB9	P27999	122 aa		2.61	□□□□□ -1.99
CCM1	YGR150C	RPL14A	P36105	138 aa	Known RBP	2.61	□□□□□ -1.99
CCM1	YGR150C	RPL14B	P38754	138 aa	Known RBP	2.61	□□□□□ -1.99
CCM1	YGR150C	YIL054W	P40524	105 aa		2.61	□□□□□ -1.99
CCM1	YGR150C	YGL193C	P53097	103 aa		2.61	□□□□□ -1.99
CCM1	YGR150C	VPS28	Q02767	242 aa		2.61	□□□□□ -1.99
CCM1	YGR150C	YCR043C	P25361	127 aa		2.61	□□□□□ -1.99
CCM1	YGR150C	VMA11	P32842	164 aa		2.61	□□□□□ -1.99
CCM1	YGR150C	FMP46	P36141	133 aa	Known RBP	2.61	□□□□□ -1.99
CCM1	YGR150C	YPT31	P38555	223 aa	Known RBP	2.61	□□□□□ -1.99
CCM1	YGR150C	VTC1	P40046	129 aa	RIP-Chip data	2.61	□□□□□ -1.99	not detected
CCM1	YGR150C	BUD25	P85052	153 aa		2.61	□□□□□ -1.99
CCM1	YGR150C	SPS2	P08459	502 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	RNP1	P32385	249 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	YOR062C	P36025	268 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	FYV4	P38783	130 aa	Predicted RBP	2.6	□□□□□ -1.99
CCM1	YGR150C	MIG3	P39943	394 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	MOB1	P40484	314 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	REE1	P40893	198 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	IGD1	P43598	195 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	YKR005C	Q02203	525 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	ATO3	Q12359	275 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	PAN1	P32521	1480 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	CBP6	P07253	162 aa	Predicted RBP	2.6	□□□□□ -1.99
CCM1	YGR150C	RCN1	P36054	211 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	YBR242W	P38331	238 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	YER134C	P40081	178 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	DML1	Q03652	475 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	SPG3	Q04398	127 aa	Predicted RBP	2.6	□□□□□ -1.99
CCM1	YGR150C	TSC11	P40061	1430 aa		2.6	□□□□□ -1.99
CCM1	YGR150C	YEL009C-A	A0A023PZF2	135 aa		2.59	□□□□□ -1.99
CCM1	YGR150C	VAR1	P02381	398 aa		2.59	□□□□□ -1.99
CCM1	YGR150C	SGA1	P08019	549 aa		2.59	□□□□□ -1.99
CCM1	YGR150C	GPA2	P10823	449 aa		2.59	□□□□□ -1.99
CCM1	YGR150C	TOM40	P23644	387 aa	Known RBP	2.59	□□□□□ -1.99
CCM1	YGR150C	YAE1	P47118	141 aa	Predicted RBP	2.59	□□□□□ -1.99
CCM1	YGR150C	ISD11	Q6Q560	94 aa		2.59	□□□□□ -1.99
CCM1	YGR150C	RPL9A	P05738	191 aa	Known RBP	2.59	□□□□□ -1.99
CCM1	YGR150C	GPI18	P38211	433 aa		2.59	□□□□□ -1.99
CCM1	YGR150C	RPL9B	P51401	191 aa	Known RBP	2.59	□□□□□ -1.99
CCM1	YGR150C	YKL068W-A	Q3E826	78 aa		2.59	□□□□□ -1.99
CCM1	YGR150C	YAL067W-A	Q8TGK6	75 aa		2.59	□□□□□ -1.99
CCM1	YGR150C	HSL1	P34244	1518 aa		2.59	□□□□□ -2
CCM1	YGR150C	YAR023C	D6VPM8	179 aa		2.58	□□□□□ -2
CCM1	YGR150C	AHT1	P29589	182 aa		2.58	□□□□□ -2
CCM1	YGR150C	ASK1	P35734	292 aa		2.58	□□□□□ -2
CCM1	YGR150C	HTD2	P38790	280 aa	Known RBP	2.58	□□□□□ -2
CCM1	YGR150C	RSM10	Q03201	203 aa		2.58	□□□□□ -2
CCM1	YGR150C	RNH202	Q05635	350 aa		2.58	□□□□□ -2
CCM1	YGR150C	ANB1	P19211	157 aa		2.58	□□□□□ -2
CCM1	YGR150C	HSP12	P22943	109 aa	Known RBP	2.58	□□□□□ -2
CCM1	YGR150C	YBL059W	P34224	193 aa		2.58	□□□□□ -2
CCM1	YGR150C	ETR1	P38071	380 aa		2.58	□□□□□ -2
CCM1	YGR150C	RRT13	P40042	185 aa		2.58	□□□□□ -2
CCM1	YGR150C	GVP36	P40531	326 aa	Known RBP	2.58	□□□□□ -2
CCM1	YGR150C	DAD3	P69850	94 aa		2.58	□□□□□ -2
CCM1	YGR150C	EST3	Q03096	181 aa		2.58	□□□□□ -2
CCM1	YGR150C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.58	□□□□□ -2	not detected
CCM1	YGR150C	YLR042C	Q07990	161 aa		2.58	□□□□□ -2
CCM1	YGR150C	HAP2	P06774	265 aa		2.57	□□□□□ -2
CCM1	YGR150C	CAX4	P53223	239 aa		2.57	□□□□□ -2
CCM1	YGR150C	TVP18	Q04767	167 aa		2.57	□□□□□ -2
CCM1	YGR150C	FYV12	Q08559	129 aa		2.57	□□□□□ -2
CCM1	YGR150C	HUT1	Q12520	339 aa		2.57	□□□□□ -2
CCM1	YGR150C	KTI11	Q3E840	82 aa		2.57	□□□□□ -2
CCM1	YGR150C	TIM9	O74700	87 aa		2.57	□□□□□ -2
CCM1	YGR150C	CPA1	P07258	411 aa	Known RBP	2.57	□□□□□ -2
CCM1	YGR150C	RFS1	P38234	210 aa	Known RBP	2.57	□□□□□ -2
CCM1	YGR150C	YDR274C	P87283	123 aa		2.57	□□□□□ -2
CCM1	YGR150C	OCA6	Q12454	224 aa		2.57	□□□□□ -2
CCM1	YGR150C	ODC2	Q99297	307 aa		2.57	□□□□□ -2
CCM1	YGR150C	TRM732	Q03496	1420 aa		2.57	□□□□□ -2
CCM1	YGR150C	SPT15	P13393	240 aa	Known RBP	2.56	□□□□□ -2
CCM1	YGR150C	ARO2	P28777	376 aa	Known RBP	2.56	□□□□□ -2
CCM1	YGR150C	SWD3	P38123	315 aa		2.56	□□□□□ -2
CCM1	YGR150C	RPB11	P38902	120 aa		2.56	□□□□□ -2
CCM1	YGR150C	YGL230C	P53074	147 aa		2.56	□□□□□ -2
CCM1	YGR150C	GEP7	P53171	287 aa		2.56	□□□□□ -2
CCM1	YGR150C	SCW4	P53334	386 aa	Known RBP	2.56	□□□□□ -2
CCM1	YGR150C	YNR062C	P53748	327 aa		2.56	□□□□□ -2
CCM1	YGR150C	GAL83	Q04739	417 aa		2.56	□□□□□ -2
CCM1	YGR150C	MRPL15	P36523	253 aa		2.56	□□□□□ -2
CCM1	YGR150C	YEL028W	P39989	153 aa		2.56	□□□□□ -2
CCM1	YGR150C	ARC15	P40518	154 aa	RIP-Chip data	2.56	□□□□□ -2	not detected
CCM1	YGR150C	DSK2	P48510	373 aa		2.56	□□□□□ -2
CCM1	YGR150C	EMC4	P53073	190 aa		2.56	□□□□□ -2
CCM1	YGR150C	ELC1	Q03071	99 aa		2.56	□□□□□ -2
CCM1	YGR150C	YDR102C	Q03864	110 aa		2.56	□□□□□ -2
CCM1	YGR150C	SYM1	Q06563	197 aa		2.56	□□□□□ -2
CCM1	YGR150C	SRL1	Q08673	210 aa		2.56	□□□□□ -2
CCM1	YGR150C	MYO2	P19524	1574 aa	Known RBP	2.56	□□□□□ -2
CCM1	YGR150C	TY1B-H	O13535	1793 aa		2.56	□□□□□ -2
CCM1	YGR150C	YHR125W	P38831	101 aa		2.55	□□□□□ -2
CCM1	YGR150C	AIM18	P38884	321 aa		2.55	□□□□□ -2
CCM1	YGR150C	RSM27	P53305	110 aa		2.55	□□□□□ -2
CCM1	YGR150C	ANT1	Q06497	328 aa		2.55	□□□□□ -2
CCM1	YGR150C	YOL085C	Q99345	113 aa		2.55	□□□□□ -2
CCM1	YGR150C	COX10	P21592	462 aa		2.55	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms